Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_2881 |
Symbol | |
ID | 7299812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 3181830 |
End bp | 3182861 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 643595692 |
Product | tyrosine recombinase XerC |
Protein accession | YP_002493284 |
Protein GI | 220917980 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.312354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCCCG ACGCGTCCGC GCTGCCGCCC GAGGTGCCGG AGGAGATCCG GCGCTTCGAC GCGTACCTCG CCTCGGAGAA GCGGGCCTCG CCGCACACGC GCAAGGCGTA CCAGGTGGAC CTGGCCCAGT ACGCGGCCTA CCTCGCCGAC CAGGGCCAGC CGCTCGTGCC GTCCTCGCCC GCGCTGGTGC GCGGCTTCCT GGCGCGCCAG GCCGGGGCCG CCGGGGCGGT GAGCCTCGGC CGCAAGCTCT CCGCGCTCCG CTCGCTGTAC CGCTTCCTGG TGCGCGAGGG GCTCGCGCCC GGGAACCCGG CCCGCGCCGT GGCGAGCCCG AAGCGGCCGA AGCGCCTGCC GGAGGTGCTG CCCGAGGAGG AGGTCGCGGC GCTGGTGGAG ACGCCCGACG CCGCCACGGA GGCGCCGCTC GCGCTGCGCG ACCGCGCGTT CCTGGAGCTG CTCTACGGGA GCGGGCTGCG CGTCTCGGAG CTGACGGGCC TGGACCTCGA GGACCTCGAC CTCGCGGGCG GGCTGGTGCG CGTGCTCGGC AAGCGGAACA AGGAGCGCAT CGTGCCGTTC GGCGCACCGG CCGCCGACGC GCTCCGGCGC TACCTCGACG GCGCGCGCCC GGTGCTGGCC GCGGGGCCGG ACCACGCCCG CGCCGGGGAC GCGGTGTTCC TGAACTTCCG CGGGGGCCGG CTCACCAGCC GCTCGGTGGC GCGCCGGCTG GACGGCTGGG TGCTCGCCTC CGGCCTGCCG CGCCACGTGC ACCCGCACGT GCTGCGCCAC TGCTTCGCGA CGCACCTGCT CGGCAACGGC GCCGACCTGC GCGGCATCCA GGAGCTGCTC GGGCACGCGT CGCTCTCCAC CACGCAGCGG TACACGCACC TCGACTGGAA GCGGCTCGCG GCGGTCTACG ACGCGGCCCA CCCGCGCGCG CGGGCCGGGG CGGCGGGCGG CGCGGGCGCC GGCGGACCCG GAGGCGACGT GCCCGGCGCG GCGCCCGGCC GCAGCGCCCG CGGCGGCCGC GGCCCGCGCT GA
|
Protein sequence | MTPDASALPP EVPEEIRRFD AYLASEKRAS PHTRKAYQVD LAQYAAYLAD QGQPLVPSSP ALVRGFLARQ AGAAGAVSLG RKLSALRSLY RFLVREGLAP GNPARAVASP KRPKRLPEVL PEEEVAALVE TPDAATEAPL ALRDRAFLEL LYGSGLRVSE LTGLDLEDLD LAGGLVRVLG KRNKERIVPF GAPAADALRR YLDGARPVLA AGPDHARAGD AVFLNFRGGR LTSRSVARRL DGWVLASGLP RHVHPHVLRH CFATHLLGNG ADLRGIQELL GHASLSTTQR YTHLDWKRLA AVYDAAHPRA RAGAAGGAGA GGPGGDVPGA APGRSARGGR GPR
|
| |