| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2685 |
|---|
| Symbol | |
|---|
| ID | 7299686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 2963518 |
|---|
| End bp | 2964033 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643595488 |
|---|
| Product | transcriptional regulator, CarD family |
|---|
| Protein accession | YP_002493088 |
|---|
| Protein GI | 220917784 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000114953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAA CGCAGGCTAC TCAGGTCGCC CCGAATTTCA AGGTCGGGGA CAAGGCCGTC
TACCCCGGGC AGGGGGTCGG CGAGGTCATG GGCATCGAGC ACAAGGAGGT CGCCGGCCAG
CGACAGTCGT TCTACGTGCT CCGCATCCTG GAGAACGGGA TGAAGATCAT GATCCCCATG
AACAAGGTCG GCTCGGTCGG CCTGCGCGAG ATCATCGGGG AGAAGGACGT CCGCCGCGTC
TACGGGATCC TCCGGGAGAA GGAGGTCTCG GTGGACTCCA CCACCTGGAA CCGCCGCTAC
CGGGAGTACA TGGACAAGAT CAAGACCGGC AGCGTGTTCG AGATCGCCGA GGTGCTGCGC
GACCTCTACC TGCTCCGGTC GGACAAGGAC CTCTCGTTCG GCGAGCGGAA GATGCTCGAC
ACCGCGCGCT CGCTCCTCAT CAAGGAGCTC GCCATCGCGA AGGCGTGCGA CGAGCAGGAC
GTCGAGGACG ACCTGAAGAA GATCTTCAAC TGCTGA
|
|---|
| Protein sequence | MSATQATQVA PNFKVGDKAV YPGQGVGEVM GIEHKEVAGQ RQSFYVLRIL ENGMKIMIPM
NKVGSVGLRE IIGEKDVRRV YGILREKEVS VDSTTWNRRY REYMDKIKTG SVFEIAEVLR
DLYLLRSDKD LSFGERKMLD TARSLLIKEL AIAKACDEQD VEDDLKKIFN C
|
|---|
| |