| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2678 |
|---|
| Symbol | uvrC |
|---|
| ID | 7299679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 2954354 |
|---|
| End bp | 2956477 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643595481 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_002493081 |
|---|
| Protein GI | 220917777 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
|---|
| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGA ACCTGCGCAG GAAGCTGGAC GAGCTGCCCG CCGAGCCGGG CTGCTACCTC
ATGAAGGACC GGGCCGGCGA GGTGGTCTAC GTCGGCAAGG CGTCCAGCCT GCGCTCGCGC
GTGCGCTCCT ACTTCGACCC GGGCCGCGGC GATCAGCGCG CGTTCGTGGC GCTGCTCGAC
GAGCTGCTCG GCGACCTCGA GGTGATCGTC ACCCGCTCCG AGAAGGAGGC GGTGCTCCTC
GAGAACGAGC TCATCAAGAA GCACCGCCCG CGCTTCAACG TCCGGCTGCG CGACGACAAG
GACTTCATCG TCCTGAAGCT CGACGAGCGC CACCCGTACC CGCGCCTGGA GGTGCGGCGC
GCCCGGGAGA AGCGGCAGCC GGGGGCGCGC TACTTCGGCC CGTACTCCTC GGCCTCGTCC
ATCCGCGAGA CGCTGCGCAT GGTGAACCGG CACTTCCAGC TCCGGACCTG CAGCGACCAC
GTCTTCGACC ACCGCAAGCG GCCCTGCATC CTGTACCAGA TCCACCGCTG CCCGGCGCCC
TGCGTCTACG AGGTGGCGGC GGAGGAGTAC CGGCAGTCGG TCGAGGACGC GGTGGAGTTC
CTGGAGGGCC GCGAGGGCGA GCTGGTGGAG CGCCTGCGCG GGCGCATGGC GGGCGCGGCG
GAGGGGTTGC GGTTCGAGGA GGCGGCGCGG CTCCGCGACC AGCTCCAGGC GGTGGAGCGG
AGCCTCGAGA AGCAGCGGGT GCTGATGTCG GATCGCGGCG ATCGCGACGT CATCGGCCTC
TACCGCGAGG GGCCGGACCT GGTGGTCCAG GTCCTCTCCA TGCGCGCCGG CAAGCTGCAG
GACGCGCAGG CGCACCCGTT CCGCGAGCAG GAGTTCCCCG ACGAGGAGAT CCTGTCCTCG
TTCCTGTCGC TCTACTACGA GCACACCGAC GCGCCGGACG AGATCCTGGT GCCGCTCGAG
CCGGTCCAGG CCGAGGCGCT CGCCGACGTG CTCTCGGAGC GGCGCGGGCG GCGGGTGCGG
CTGCTCACCC CGCAGCGCGG CGCGAAGGCC GACCTGCTCG ACGTGGCCCG CCGCAACGCG
GAGCAGGGGT TCCGGGCCTG GCACGAGCAC GACGAGCGGC GCGAGCAGGC GCTGGCCGCC
GTGGCCCGGG CGCTGCACCT GGCGCGGCCG CCGCGCTGGA TGGAGTGCTA CGACATCTCG
ACGTTCCAGG GCGCGCTCGC GGTCGGCTCG GGCGTGTCGA TGAAGGACGG CGAGCCGGAC
AAGGCGAACT ACCGCCGCTA CAAGGTGAAG GCGGTGGCGG GGCAGGACGA CTTCGCCATG
CTGCACGAGG TCATCACCCG CCGGCTGCGG CGGGCGCTGG GGGAGGGACA GCTGCCCGAC
CTCATCGTGA TCGACGGCGG GAAGGGCCAG CTCAACGCGG CGCTGGCGGC GGCGAAGGAC
CTGGGCGTCC CGACGCGCCC GTCGCCGGGC AACCCCGACG CGCCGTTCGT CGAGCTGGTG
GGGCTCGCCA AGAGCCGGCT GGTGGACGGC CCGTCGCTCG GGACGGCGCG GGTGGTGGGC
CGGCGCGGGC GGCGCGCGGA GGCGCGCCTG GCGGACGCGG CCGAGGCGGC GGAGAAGGGG
TTCGTGTCCG AGCTGGCGCG CAGCCCGGAG CGCGTGTTCC TGCCCGGCCG CAAGGACCCG
GTGGTGCTGC GGCAGAACTC CGCGGAGCTG TTCCTGCTGG CCCGGCTGCG CGACGAGGCG
CACCGCTTCG CCATCACGTT CCACCGCAAG CTGCGGCGCG AGCGGAACTT CCAGAGCGTG
CTCGAGGAGA TCCCGGGGAT CGGGGAGGGC CGCAAGCGGG CGCTGCTGCG CCACTTCGGC
GCGCTGCGCC GCGTCCGGGA GGCGACGCCC GAGGAGATCG CGCAGGTGGA GGGCTTCGGG
CCGAGGCAGG CGGCGGCCGT GCACGCGTTC TTCCACCGAC CGGACGCGCC GCCGATCGCC
GCGGACGAGC CGTCCGGCGC GCCCGCCGGC GCGCCCGGCG GGGGTCCCGC CGAGGCGAGC
CCGGAGGCGG TGGCCGCCGC CACCGAGGCC GAGATCGACG CCGCGCTGGC CGACGAGGAT
GCGTCCCCGG AGCCCGCGGC TTAA
|
|---|
| Protein sequence | MDANLRRKLD ELPAEPGCYL MKDRAGEVVY VGKASSLRSR VRSYFDPGRG DQRAFVALLD
ELLGDLEVIV TRSEKEAVLL ENELIKKHRP RFNVRLRDDK DFIVLKLDER HPYPRLEVRR
AREKRQPGAR YFGPYSSASS IRETLRMVNR HFQLRTCSDH VFDHRKRPCI LYQIHRCPAP
CVYEVAAEEY RQSVEDAVEF LEGREGELVE RLRGRMAGAA EGLRFEEAAR LRDQLQAVER
SLEKQRVLMS DRGDRDVIGL YREGPDLVVQ VLSMRAGKLQ DAQAHPFREQ EFPDEEILSS
FLSLYYEHTD APDEILVPLE PVQAEALADV LSERRGRRVR LLTPQRGAKA DLLDVARRNA
EQGFRAWHEH DERREQALAA VARALHLARP PRWMECYDIS TFQGALAVGS GVSMKDGEPD
KANYRRYKVK AVAGQDDFAM LHEVITRRLR RALGEGQLPD LIVIDGGKGQ LNAALAAAKD
LGVPTRPSPG NPDAPFVELV GLAKSRLVDG PSLGTARVVG RRGRRAEARL ADAAEAAEKG
FVSELARSPE RVFLPGRKDP VVLRQNSAEL FLLARLRDEA HRFAITFHRK LRRERNFQSV
LEEIPGIGEG RKRALLRHFG ALRRVREATP EEIAQVEGFG PRQAAAVHAF FHRPDAPPIA
ADEPSGAPAG APGGGPAEAS PEAVAAATEA EIDAALADED ASPEPAA
|
|---|
| |