| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2672 |
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| Symbol | |
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| ID | 7299673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 2948997 |
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| End bp | 2950832 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643595475 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002493075 |
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| Protein GI | 220917771 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.137026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCAAGGA CCTACCGCGC TACCGACTAC ACCCTCGAGT TCGTGGCCGA TCTCCTCGCC
AGGGAGGGGA TCCTCACCGA CGACGCGCGC CGCACCGCCA CCGCCCGGGA GGGCGTCCAG
CGCGCGCGCC TGCTCCGCGA CGGCGCCTCG CGCAGCGGCG GCCGGGCGCT GCGGCGCGCC
GAGCTCTCGC CGGTCGAGGT GCTCGCCTCC TTCGAGTTCC CCGACGCCCG GCGCGACGCC
GAGCTGGTGG ACGAGGACAA GGCCACGCAG GCCGTCGCGA AGGCGGTGGG GATCCCGTAC
CGCAAGATCG ACCCGCTGAA GCTCGACGCC CAGCTCATCA CCCGGACGCT GTCGCGCCCC
TTCGCGCGCA AGCACGCGGT GCTCCCGCTG GAGCGCCGCA ACGGCTCGCT GGTGGTGGCG
GCCGCGAACC CGTTCGACCG CGAGCTGCTG GAGAACCTGC GCGGCCTGAT CGGCGCCGAG
GTCGAGGCGG TCCTCTCGTC GCCCTCGGAC ATCCACCGCG CCATCGCCGA GGTGTACGGG
TTCCGCCAGC AGATCTCGCA GGCCCGCGTC GAGCTGGAGG GCGGCGGCGG CGCCCCGGAC
GTCACGAACC TCGAGCAGTT CGTCAACCTG TCCGGCATCG ACGCGCTGGA GGCGTCGAGC
GAGCCGGTGG TCGCGGCGGT CGAGTACCTG CTGCACTACG CGTTCGAGCA GCGGGCCAGC
GACATCCACC TCGAGCCGCG GCGGGAGGAG TCGATCATCC GCATGCGGAT CGACGGCGTG
CTCCACCCGG TCCACCGCAT CCCGAAGGCG GTGCACGGCG CCATCGCCAA TCGCTTCAAG
ATCATGAGCC GGCTCGACAT CGCGCTGAAG CGCCCGCAGG ACGGGCGCAT CCGCACCGCC
CGCGGCGACG CCGAGATGGA GCTGCGCGTC TCGACCGTCC CCACCACCTT CGGCGACAAG
GTGGTGATCC GCGTGCTCGA CCCGACCGTG CTGGTGCGCG ACCTCTCCGA GCTGGGGTTC
CTCCCCGACG AGCGCGACCA GTTCGAGCGC TGGCTGCTGC GGCCGCACGG CCTGGTGATC
GTGACCGGGC CCACCGGCAG CGGGAAGACC ACCACGCTCT ACTCGGCGCT GCAGGCGCTC
GCCTCGCCCG AGGTGAACGT CGTGACCATC GAGGATCCCA TCGAGATGGT CCACGAGGAC
TTCAACCAGA TCGCCGCCAA CCAGAAGACC GGCACCGGCT TCGCCGAGGC GCTGCGCCAC
GTGCTGCGCC AGGATCCGGA CGTGGTGATG GTGGGCGAGG TCCGCGACGC GGAGACCGCC
GCCCAGGCGG TCCAGGCGGC GCTCACCGGG CACATGGTGC TGACCACGCT GCACACGAAC
GACACGGTGA GCGCGGTGGC CCGCCTGCGC GACCTGGGCG TGCCGAGCTT CCTCATCGCC
GCCACGCTCA CCGGCATCGC CGCGCAGCGG CTGGTCCGGC AGGTGTGCCC CTCCTGCGCC
GAGGACGTGC CGCTCACGGC GGACGAGGTG CAGGCGCTGG GCGTGCCGCA CCCCGAGGAC
CACGCCGGCA AGCTGCTGGC CCGGCGCGGC CGCGGGTGTC CCAAGTGCCG GTTCACCGGC
TACTACGGGC GCAGCGGCAT CTTCGAGGTC CTGCCGGTGA ACGCGCGCCT GCGCCACCTG
GTGGCGGAGG GCGCCACGCC CGAGGTGCTG CTCCGCACCG CCCGCCAGGA CGGGCTGCGC
CCGCTGCGCG AGCACGCGGT GCGCAAGGTG GCCGCGGGCG TCACCTCCTT CGAGGAGGCG
ATGCGCGCCA CCGCCGACGC CGAGGCGGCG CCGTGA
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| Protein sequence | MPRTYRATDY TLEFVADLLA REGILTDDAR RTATAREGVQ RARLLRDGAS RSGGRALRRA
ELSPVEVLAS FEFPDARRDA ELVDEDKATQ AVAKAVGIPY RKIDPLKLDA QLITRTLSRP
FARKHAVLPL ERRNGSLVVA AANPFDRELL ENLRGLIGAE VEAVLSSPSD IHRAIAEVYG
FRQQISQARV ELEGGGGAPD VTNLEQFVNL SGIDALEASS EPVVAAVEYL LHYAFEQRAS
DIHLEPRREE SIIRMRIDGV LHPVHRIPKA VHGAIANRFK IMSRLDIALK RPQDGRIRTA
RGDAEMELRV STVPTTFGDK VVIRVLDPTV LVRDLSELGF LPDERDQFER WLLRPHGLVI
VTGPTGSGKT TTLYSALQAL ASPEVNVVTI EDPIEMVHED FNQIAANQKT GTGFAEALRH
VLRQDPDVVM VGEVRDAETA AQAVQAALTG HMVLTTLHTN DTVSAVARLR DLGVPSFLIA
ATLTGIAAQR LVRQVCPSCA EDVPLTADEV QALGVPHPED HAGKLLARRG RGCPKCRFTG
YYGRSGIFEV LPVNARLRHL VAEGATPEVL LRTARQDGLR PLREHAVRKV AAGVTSFEEA
MRATADAEAA P
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