| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2598 |
|---|
| Symbol | |
|---|
| ID | 7298043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 2877375 |
|---|
| End bp | 2878073 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 643595401 |
|---|
| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
|---|
| Protein accession | YP_002493001 |
|---|
| Protein GI | 220917697 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0148388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCCG CCCTCGCCGC CCTCGCCCGC TACGGTCCGC CCGCCCCCGA GCCGGACGAC
GCCCTGCTCC GGCGCCACGC GCCGCTGCTC GATCGCTGCG CCCGCCGCCT CGCCGCCCGC
ACCGGCCATG CGGTGGAGCC CGGCGATCTC TGGTCCGCCG GCGCCATGGG CTTGCTCGAG
GCGGCGCGCC GCTACGACCC GGCGCACGAC GTCCGCTTCG AGACCTTCGC CGAGCACCGG
GTGCGCGGCG CGATGCTGGA CGAGCTGCGG CGGATGGACC ACCTGCCGCG GCGCCTCCGC
GCGGACGCCG ACCGCGTGCT CGCGGCCCGG GCCCGCCTGG AGCAGTCCCT CGGCCGCGAG
CCCGACCCGG TGGAGGTGGC CGAGGCGGCG GAGCTCCCCG CCGAGCAGGT GGGGGAGCTG
CTCCTGCTCG CGTCGCCGCC CGTGCCGGTC GAGGACGACC TCGCGCCCAC CCCCGCCCTG
CCCGCGGACG AGGCCCTCGG GGCGGCCGAG CGGCGCCGGG CCCTGGCGCG CATGGTGGCG
GCGCTGCCGG AGCGGCTCCA GGTGCTGCTG GCGCTCTACT ACGACGAGGC GCTCACCTAC
CGGGAGATCG CGAAGGTGCT GGGCGTGTCC GAGCCGCGCG TCTGCCAGCT CCACGCGGAG
GCCGTGAAGA GGCTCCGCGC GCTCATGTCG GATACGTGA
|
|---|
| Protein sequence | MHAALAALAR YGPPAPEPDD ALLRRHAPLL DRCARRLAAR TGHAVEPGDL WSAGAMGLLE
AARRYDPAHD VRFETFAEHR VRGAMLDELR RMDHLPRRLR ADADRVLAAR ARLEQSLGRE
PDPVEVAEAA ELPAEQVGEL LLLASPPVPV EDDLAPTPAL PADEALGAAE RRRALARMVA
ALPERLQVLL ALYYDEALTY REIAKVLGVS EPRVCQLHAE AVKRLRALMS DT
|
|---|
| |