| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2594 |
|---|
| Symbol | |
|---|
| ID | 7298039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 2872161 |
|---|
| End bp | 2873228 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 643595397 |
|---|
| Product | type III secretion exporter |
|---|
| Protein accession | YP_002492997 |
|---|
| Protein GI | 220917693 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.144753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGACG CCGAGGACCA GGAGAACCGC ACCGAGCCGG CCAGCGCGCA GCGCCTGGCC
CGCGCCCGCG ACGAGGGCCA GGTGCCGCTC GGCCACGACG CCGCGCTGGC GGCCGGGCTG
GCCGGCGCGG CGCTGGCGCT CGGGGCGCAG GCGCGCGCGC TGGGCGGCGG GCTCTCCGAG
CTGATGCGCC AGGCCGCCGC CTCGGTGGAC CGCACGCCGT TCTCGAGCCT GCCCGCGCTG
GCGCTCCGCC CGGCGAGCGC GGCGCTGGCC GTGTGCGCGG CCGCGGCGCT GGCGGGCGCG
GCCGCCACGC TGGCGCAGAC GCGCGGCGGG TTCTGGCCGC GGCTGGCGGC CCCGGATCCC
TCGCGCCTGC TGCAGCCCGG CCGGCTGCTG CGCCCGCTCT CCCGCGACTT CCTCCTCGAC
CTGGCCCTGG CGCTCGCGAA GGTCGCGGCG CTCGGCGCGG CCGCCTGGAC CGCCGCGCGC
GACGGGCTGG CCCGGCTCCC GGCGCTGCTG GGCGCCGCGC CGGGCGAGCA GCTCGCCATG
GTCTTCGCGC TGGTGGCGCG CGTGGCGCTC CCGGTGCTCC TCGCCGCCGC CGCGCTCGCC
GCCGCCGAGC TGGGGCTGGC CCGCTGGCGC TTCGCGCGCA AGCACCGGAT GACGAAGGAC
GAGGCGAAGC GCGAGGTGAA GGAGGACGAA GGCGATCCGC TCGTCCGCGG GCAGCGGCGG
CGCCGCCACC GCGAGCTGCT GCGCAACCAG GCGCGCCTGG AGGTGCCGCG CGCGGACGCG
CTGGTGGTGA ACCCGACCCA CGTGGCGGTC GCGCTCCGCT ACCGGCGCGA CGAGGGACGC
GCGCCGCGCG TCACCGCCAA GGGCAAGGGC GAGCTGGCCC GCCAGATGCG GGCGCTGGCG
CGCGAGCACG GGGTCCCGGT GGTGCAGGAC GTGCCGCTGG CCCGGCTGCT GTACCGCAAG
GTGAAGGTGG GCCGGGAGAT CCCCGCCCAG ACCTACAAGG CCGTGGCCGC CGTGCTCGCG
TTCGTGTACC GCGCGGCCGG CCGCCGCGAC GGAGGGGCGC GCGCGTGA
|
|---|
| Protein sequence | MADAEDQENR TEPASAQRLA RARDEGQVPL GHDAALAAGL AGAALALGAQ ARALGGGLSE
LMRQAAASVD RTPFSSLPAL ALRPASAALA VCAAAALAGA AATLAQTRGG FWPRLAAPDP
SRLLQPGRLL RPLSRDFLLD LALALAKVAA LGAAAWTAAR DGLARLPALL GAAPGEQLAM
VFALVARVAL PVLLAAAALA AAELGLARWR FARKHRMTKD EAKREVKEDE GDPLVRGQRR
RRHRELLRNQ ARLEVPRADA LVVNPTHVAV ALRYRRDEGR APRVTAKGKG ELARQMRALA
REHGVPVVQD VPLARLLYRK VKVGREIPAQ TYKAVAAVLA FVYRAAGRRD GGARA
|
|---|
| |