| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2562 |
|---|
| Symbol | |
|---|
| ID | 7298007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 2840179 |
|---|
| End bp | 2841537 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 643595365 |
|---|
| Product | ATPase FliI/YscN |
|---|
| Protein accession | YP_002492965 |
|---|
| Protein GI | 220917661 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
|---|
| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00881379 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTGC TGGATCGCGA CGCCCTCGCC CGCGCGCTCG CCGAGGCCGA TCCCACCCCG
CTCACCGGGA CGGTGGTGCG GGCGGCCGGC CTGCTCGTCG AGGCGCTCCT CCCCCAGGTG
CCGGTGGGGA CGGCCTGCGA GATCCACGCG CAGGACGGCG CGGTGGTGCT CGCGGAGGTG
ATCGGGTTCC AGGGCGGCAC GGCGCGGCTC ATGCCGCTGT CCGGGATCCA GGGCGTGGCG
GAGGGCTGCG CGGTGGTGCC GCGCGCCAGC GCGGATCGCA TCGCGGTGGG CGAGGCGCTG
CTCGGCCGCG TGGTGGACGC GTCGCTCCGC CCGGTGGACG GCGGCGCGGT GCCCATGCTG
CGCCAGCGCA CCGCGCTGCA CGCCTCCCCG CCGCCCGCGC TCTCGCGCCG CCGGGTGGAG
CGGGCCGTGC CGCTCGGCAT CCGCGCGATC GACGCGTGCC TGACGGTCGG CGAGGGCCAG
CGCATCGCGG TGATGGCCGG TCCGGGCGTG GGCAAGAGCG TGCTGCTCGG GATGCTGGCG
CGCTCCGCCA CCGCGGACGT GGTGGTGGTC GGGCTCATCG GCGAGCGCGG CCGCGAGGTG
CGCGAGTTCG TGGAGCGCGA CCTCGGGCCG GGCCTGGCCC GCGCGGTCGT GGTGGTGGCC
ACCAGCGACG CCTCGCCGCT CGAGCGGCTG CGCGCCGCCA TGGCGGCGAC CGCGGCCGCG
GAGTGGTTCC GAGGCCGCGG CCGGCGGGTG CTCCTGCTGG TGGACTCGCT CTCGCGCGTG
GCCCAGGCGC AGCGCGAGAT CGGCCTCGCC GCGGGCGAGC CTCCCACCAC CCGCGGCTAC
CCGCCGTCGG CGTTCGCGAT CCTGCCCCGC CTGGTCGAGC GCGCCGGCAA CGACGCCGGC
CCGGGCAGCA TCACCGCGTT CTACACGGTG CTGGCGGAGG GCGACGACCA CGCCGGCGAT
CCCATCGCCG ACGCCGCGCG CGCCACGCTG GACGGCCACC TGGTGCTGTC GCGCCGCCTG
GCCGAGTCCG GCCACTTCCC GGCCATCGAC GTGCTCGCGT CGGTGTCGCG CGTGATGAAC
GACATCGTTC CGGCGGAGCA TCGCGCCCTG GCCCGCGAGG CGCGCGAGGT GCTCTCGGCG
CACCGCGAGG CCGCCGACCT GGTCGAGGTG GGCGCGTACG CGGCGGGGTC GAACCCGCGC
GTCGACCGCG CGCTCCGCTG CATCGAGCCG CTGCGGGCGT TCCTCCGGCA GGACCCGGCG
GAGCGGACCC CCATGCCCGA GGCGCTGGAG CGCCTGGCGC GGCTGCTGGC CCCGCCCGCG
GCAGCCCCGC CCGCGAGGAA GGAGGCGGCG CATGGCTAG
|
|---|
| Protein sequence | MTLLDRDALA RALAEADPTP LTGTVVRAAG LLVEALLPQV PVGTACEIHA QDGAVVLAEV
IGFQGGTARL MPLSGIQGVA EGCAVVPRAS ADRIAVGEAL LGRVVDASLR PVDGGAVPML
RQRTALHASP PPALSRRRVE RAVPLGIRAI DACLTVGEGQ RIAVMAGPGV GKSVLLGMLA
RSATADVVVV GLIGERGREV REFVERDLGP GLARAVVVVA TSDASPLERL RAAMAATAAA
EWFRGRGRRV LLLVDSLSRV AQAQREIGLA AGEPPTTRGY PPSAFAILPR LVERAGNDAG
PGSITAFYTV LAEGDDHAGD PIADAARATL DGHLVLSRRL AESGHFPAID VLASVSRVMN
DIVPAEHRAL AREAREVLSA HREAADLVEV GAYAAGSNPR VDRALRCIEP LRAFLRQDPA
ERTPMPEALE RLARLLAPPA AAPPARKEAA HG
|
|---|
| |