| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2554 |
|---|
| Symbol | |
|---|
| ID | 7298000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 2833103 |
|---|
| End bp | 2834326 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 643595357 |
|---|
| Product | sigma54 specific transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002492957 |
|---|
| Protein GI | 220917653 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.149279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA TCGCCACCAC CGGGCCGGAC GCAGCGCCGC AGCAGGGCCA GCACGGGCTC
GTGTTCGGCC CCGGCAGCCC GCTCGGCGCG CTGGTGCGGA CCTGCGAGCG CATCGCGCGG
AGCGAGGCGA CGGTGCTGCT GACGGGCGAG ACCGGCACGG GCAAGGAGGT GTTCGCGCGC
GCCATCCACG CCGCGAGCCC GCGCGCGGCG CGGCCGCTGG TCCCGGTGAA CTGCGGCGCC
ATCCCGGAGG CGTTGCTGGA GAGCGAGCTG TTCGGCCACG TGCGCGGCGC GTTCACCGGC
GCGATGGCCT CGCGGCGCGG GCGGGTGGCG GCCGCCGAGG GCGGCACGCT GTTCCTCGAC
GAGGTGGGCG AGCTGCCGCT GGCGCTCCAG GTCAAGCTGC TGCGCGTCCT CCAGGAGCGG
ACCTACGAGC CGGTGGGCTC GACCGAGGCG GTCCCCGCCG ACTTTCGCCT GGTGGCCGCC
ACCAACCGCG ATCTCTCCGC CGAGGTGGCC GCCGGCCGCT TCCGCCGCGA CCTCTACTAC
CGCCTGCTGG TCTGCCCGCT CGAGATCCCG CCGCTCCGCG CGCGGAAGGG CGACGCGCTG
CGCCTGTTCC AGCACTTCTG GGCCGCGCGC GGGGAGCGCC GTCCGCTCGA GCCCGAGGTG
GCGGAGGCGC TCGCCGCCTA CGACTGGCCG GGCAACGTCC GCGAGCTGGA GAACCTGGTG
GAGCGGCTCT CGGTCTGCGC CGAGGGCGCC GTCATCCGCG TGGCCGACCT CCCGGTCGCG
CTGCGCTGCC GCCGCGCGAA CGACGCGGCG CGCGCGCTCG CCCTCCCCGC GGCCCCGGCG
TCCGAGGACG CGCCGGCGTC GATCCCGGCC CGCGCCGCGG AAGGCGACGC GGCGCCCCCG
CCGGCGCCGG GGGACAGCGC CGCCGCGGCG CCCGCCACCG CGGGGGAGGC GATCGACCCG
GCCGTGCTGC GCGCCCTGAC GGCGGAGGAC GCGCCCCCGC CTGCCGAACC GACCTTCGAC
GCCGGCCGGC CGGTGGACCT GCCCGGCCTG CTGCGGCGCC TGGAGGACGC GTACATCTCG
GCTGCGCTGG CGCGGACCGG CGGCAACAAG AAGGCGGCGG CCGACCTGCT GGGGCTGCAG
CGCACCACGC TGGTGGAGAA GCTGCGCCGC CGCAGCCGCG AGGCGATCGC CGCGGCGCCG
ACGGCCCACG CCGCCCAGGC CTGA
|
|---|
| Protein sequence | MTTIATTGPD AAPQQGQHGL VFGPGSPLGA LVRTCERIAR SEATVLLTGE TGTGKEVFAR
AIHAASPRAA RPLVPVNCGA IPEALLESEL FGHVRGAFTG AMASRRGRVA AAEGGTLFLD
EVGELPLALQ VKLLRVLQER TYEPVGSTEA VPADFRLVAA TNRDLSAEVA AGRFRRDLYY
RLLVCPLEIP PLRARKGDAL RLFQHFWAAR GERRPLEPEV AEALAAYDWP GNVRELENLV
ERLSVCAEGA VIRVADLPVA LRCRRANDAA RALALPAAPA SEDAPASIPA RAAEGDAAPP
PAPGDSAAAA PATAGEAIDP AVLRALTAED APPPAEPTFD AGRPVDLPGL LRRLEDAYIS
AALARTGGNK KAAADLLGLQ RTTLVEKLRR RSREAIAAAP TAHAAQA
|
|---|
| |