Gene A2cp1_2537 details

Gene Information

• Locus tag: A2cp1_2537
• ID: 7297983
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: -
• Start bp: 2809157
• End bp: 2811154
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643595340
• Product: YD repeat protein
• Protein accession: YP_002492940
• Protein GI: 220917636
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3209] Rhs family protein
• TIGRFAM ID: [TIGR01643] YD repeat (two copies)

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.424104
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGTAC GGCGGATACA GCGTTCAGCA GTCTACCGTC GCAAGACGCC CGTCGTCGGG 
CGGATACGCT TCGCCTACGA TGCCCGCGGC AACCTGCTCC AGCGCACGAC CGATCACGTG 
GTCGTGACGT ACTCGTACGA TGGTCTCGAC CGCGTGAGGA CCGTGGCTGC GAGCGACACC 
TGGGATGACA AGCAGGTCTC GTACGAGCAC CGGTACGACG AGCGCGGCCA CGCTGGCCTC 
CTCACCACCA CCGTTGAGCC GGATCGCGTC GTCGAGATCG ACTACGACGC CGCCGGGCGG 
CAGAGCCGCG TGGTCGCTAC GCAGGTAGAC GGCGGCGCGC CAATCGTGAC GGAGTACGGC 
TACGATGTGG ATGGGTACGT CGAGACAGTG ACGTACCCGT CAGGACTCGT CGTGAAGGCA 
GACCGCGATC CCGCGTCGCG CGAGATTCGG AAGTTGAGCA CCTCCGACGG CACGATCGTG 
TTCGCGGATG CGATCTCGAG GTGGCCCGGC GGTCCGCTGA AGGCCTTCGT GTTCGGGAAT 
GGCCAGAGCT TCAGCCAGAC CGTCAACCTC CGGTACGAGC CCGCGTCGAT CCGTAGCGGC 
CCGCTTGCGC TCGACTACAT GATGACGGCG AGCGGCGACG TCAGCATGGT CCAGGACGGC 
GGCAGCTCCT CGCGATTTGC CTATGACTTT CGCGACCGGC TGATCGGCTT CAGCCCGGGA 
TTCGGCCCGG GTTCCGATCT GACGCATCGG TACGCCTCCT CGAGTCAGTA CACGTCGTCG 
CCGGTTGTCA CGGATCGCAT CCGCGACTCC GGCGTTCCAG GTGCGTCTGG CTTCGCGCTC 
ACCCATGCCT ATGACTACGA TTGGCAAACC AACGTCAGCT CGATCGCCGC GTACTCGGAC 
GGTCAGGCGC ACGCGGTCAT GTGCCTTCGG CACGACCCGC TGGGCCGCCT GACGCTCGTC 
GGCGCCGGCG TCAACTCGGG AGGCGATGGA ATCTCGTGTG CGCGCGACTC GGACGTGACC 
GAGCCGACGG CTCGATTCAA GTACGACGCT CAAGGGCGGC GCATCGCGCG CTGGGTCGCT 
GTCACGGGGC AGTGGACGCA CTTCGTGTTC GGCCCGGCAG GCGAGCTGCT GTCTGAGCTG 
GTGTTCACGA ACGATCCGTC GCGGCCGTGG ATGCCGCTGC GGGAGTACGT TTGGCTGGAT 
GGACGGCCCC TCGCGCAGCT CGAGTACACG CCATCGCAGG CGGCTCCCAG ACCGTACTAC 
TTCCACCTGG ACCACATCGG CATGCCTCGG GCGCTATCGA GCCCAGAGGG AGTCACGGTC 
TGGTCCGCGG CCACGAAGCC CTATGGGGAA GTCAGCGAGA CGATGACGCC CGATCCCGCC 
ACCGGGCGAA CGGTCGTGAC GAACCTGCGG CTGCCGGGGC AGTACGACGA GCGGCTGCTC 
GGCAGCCTGG GGCTCCAGGG GCCGTACTAC AACTGGAACA GGTGGTATCT GCCGGGGGTG 
GGAAGGTATC TGGAGTTGGA CCCGATTGCC TCGCGCGGGT TCTTCAACTC GGGCTACGGC 
GTGGACTGGT ACGGGTATGC GGGCCAGAAC GCGGTGCGCT ACACCGACCG GAGAGGCTTA 
TACTGGGCAC CTCCGCCGCC GTGGTGGACA GGGATCGGTG CTGCAATTGG CACCGGTATC 
GGCATAGGCA TCGGGATCTT GTGGCCAGCG CCGACCGGAG GAGATCCTTG CGAAAACAGC 
CCGCGAGGGT GCGCGGAACC TGGGCCGGGT CAAGGAGATA GTTCGGACCC TGGACCGGGA 
GCCGGGGGAG GGGCGGGGGG CGGTGGCGGT GGTTGTCCGC CCAAGGATCC ATGCCGCGTC 
CAGTACGAAG AGGCTACGGT TAGGTGCGCT GATTGGTACA CGTCTGGCGA CGACGCCCAG 
TACGACGCGT GCATGGAGCG CGCATGGAAG AACTATATCC GGTGTATTAA TGGCCTTCCC 
TGGAAGCAGA ACCCATAG 

 

Protein sequence

MTVRRIQRSA VYRRKTPVVG RIRFAYDARG NLLQRTTDHV VVTYSYDGLD RVRTVAASDT 
WDDKQVSYEH RYDERGHAGL LTTTVEPDRV VEIDYDAAGR QSRVVATQVD GGAPIVTEYG 
YDVDGYVETV TYPSGLVVKA DRDPASREIR KLSTSDGTIV FADAISRWPG GPLKAFVFGN 
GQSFSQTVNL RYEPASIRSG PLALDYMMTA SGDVSMVQDG GSSSRFAYDF RDRLIGFSPG 
FGPGSDLTHR YASSSQYTSS PVVTDRIRDS GVPGASGFAL THAYDYDWQT NVSSIAAYSD 
GQAHAVMCLR HDPLGRLTLV GAGVNSGGDG ISCARDSDVT EPTARFKYDA QGRRIARWVA 
VTGQWTHFVF GPAGELLSEL VFTNDPSRPW MPLREYVWLD GRPLAQLEYT PSQAAPRPYY 
FHLDHIGMPR ALSSPEGVTV WSAATKPYGE VSETMTPDPA TGRTVVTNLR LPGQYDERLL 
GSLGLQGPYY NWNRWYLPGV GRYLELDPIA SRGFFNSGYG VDWYGYAGQN AVRYTDRRGL 
YWAPPPPWWT GIGAAIGTGI GIGIGILWPA PTGGDPCENS PRGCAEPGPG QGDSSDPGPG 
AGGGAGGGGG GCPPKDPCRV QYEEATVRCA DWYTSGDDAQ YDACMERAWK NYIRCINGLP 
WKQNP