| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2526 |
|---|
| Symbol | |
|---|
| ID | 7297010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 2792916 |
|---|
| End bp | 2794685 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643595330 |
|---|
| Product | Chloride channel core |
|---|
| Protein accession | YP_002492930 |
|---|
| Protein GI | 220917626 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCGGA CGGGGTCACA GGACGCGAAG GCCCTGCCCA CCGCGGCGCC GCCGGTCTTC
TTCCGCTCGC TCCGGGACTT CCTGCGCGTC CTGCCGGGCG CCGCGCAGCG GTTCTGGGTG
CTGGTCATCG CGACGGGGGC GCTCTCCGGG CTGGGCTCGG GCGCGCTGCT CCTGGCGCTC
TCTGGCGTGC AGGAGCTCGC CTGGCCGCAG GCGGCGCGGT TCGTCGACTC GGTGGACGTC
TCGTCGCCCG GCCGGCGGGT GCTCGTCCCG GCGCTGGCCG GGCTGCTGGT CGGGGTCACC
GCGCTGCTCT GGCGCAAGCC GCTCGGCGGG CACGGCACGG CGCGCATCCT CGAGGCCATC
TGGCATCGCG GCCGCGAGCT GTCGCTGGGC CGGACGCTCG TGCGCGGGCT GCTCTCGATC
ACCTGCGTCG GCATGGGCGC GTCGCTGGGC CGGGAGGGCG CGCTCGTCCA GGCGGGCGCG
GCGAGCGGAT CGTGGCTGGC CGGCCGGCTC GGGGTGAGCG AGCGCCAGGC CCGCGTGCTC
GTCGCCTGCG GCGCCGCCTC GGGCATCGCG GCCGCCTACG ACGTGCCCAT CGGCGGCGCG
CTCTTCGGCC TGGAGGTGCT GCTGGGGAGC TTCGCCCTCG AGCTGCTCGG GCCCATCGCC
GTCGCCTGCG TGGTCGCCAC CGCGGTGGCG CGCACGCTGC CGGTCCCGCA CGCCACCTAC
GACATCCCCG AGTACGCGCT GCTCCACCCC GCCGAGCTGC TCCTCGGGCT CGCGCTCGCG
CCGGTGCTCG GGCTCGCGTC GGCCATCTAC GTGCGGGTGA TGGGCTGGGT CGAGGTGCGC
TTCGATCGGT TCCCGGCGCG GCTGCGGCCG ATGCTGCCGG TCCTGGGCAT GGGCGCGGTC
GGGCTGCTCG CGATCCGGTT TCCGGCCGTG CTCGGCAACG GGTTCGACAC GGTCCACCAG
GCGCTGCTCG GCGAGCTGCC GCTGCGCCTG CTGCTGGTGC TGCCGCTCCT GAAGCTCGCG
GCGAGCGCGG TGTGCGCCGG GACCGGGGTG CCCGGCGGGC TGTTCACCCC GTCGCTGTTC
TTCGGGGCCG CCATCGGCGG CGCGGCCGGG GAGCTGCTGG CGCGGGTGCT CCCAGGGGCG
CCGCCCTCCG GCGCGCTCGC GCTGGTGGGC ATGGCGGGCG TGCTGGCGGG CACCACGCAC
GCGGCGGTCT CCTCGGTGCT GATCGTGTTC GAGCTGACCG GCGACTACGG GGTGATCCTG
CCGCTCATGC TCTCGGCCGC GGTCGCCGCC GCCACCAGCC GCGCCATCGA GCCGGACTCG
CTCTACACCG CGCCGCTGCG GCGCAGCGGG GTGGCGCTGC CGGAGCTGCC GCGCCCGGAG
TGGCTGCGCA CCACGCCGGT GGCGGCGCTG GTGGAGCGCG ACGCGGAGCG CGTCCCGCCC
ACGCTCGCGT TCGACGCGCT GGTGAAGAAG CTGCTGGCGC TGCCGCCCGG GCACGACCTG
TACGTCACCG ACGCGGAGGG CGCGCTCCTC GGCGTCATCC GGCTCGACGC GCTGAAGGGC
ACCATCTCGG ACCAGGCCGA CCTGGGGATG ATCGTCGCGG CCGACGTGGT GGACCGCGAG
ATCGAGCCCA TCACCACCGC CATGACGCTC GCGGAGGTCG CGGTGCGGTT CGGGGAGACC
GACCTCGAGC GCCTGCCGGT CGTGGACGGC CAGCGGAGGC TGGTGGGCGT GGTGGCCATG
CGCGACCTGC TCGCCCGCGG GAGCTTCTGA
|
|---|
| Protein sequence | MERTGSQDAK ALPTAAPPVF FRSLRDFLRV LPGAAQRFWV LVIATGALSG LGSGALLLAL
SGVQELAWPQ AARFVDSVDV SSPGRRVLVP ALAGLLVGVT ALLWRKPLGG HGTARILEAI
WHRGRELSLG RTLVRGLLSI TCVGMGASLG REGALVQAGA ASGSWLAGRL GVSERQARVL
VACGAASGIA AAYDVPIGGA LFGLEVLLGS FALELLGPIA VACVVATAVA RTLPVPHATY
DIPEYALLHP AELLLGLALA PVLGLASAIY VRVMGWVEVR FDRFPARLRP MLPVLGMGAV
GLLAIRFPAV LGNGFDTVHQ ALLGELPLRL LLVLPLLKLA ASAVCAGTGV PGGLFTPSLF
FGAAIGGAAG ELLARVLPGA PPSGALALVG MAGVLAGTTH AAVSSVLIVF ELTGDYGVIL
PLMLSAAVAA ATSRAIEPDS LYTAPLRRSG VALPELPRPE WLRTTPVAAL VERDAERVPP
TLAFDALVKK LLALPPGHDL YVTDAEGALL GVIRLDALKG TISDQADLGM IVAADVVDRE
IEPITTAMTL AEVAVRFGET DLERLPVVDG QRRLVGVVAM RDLLARGSF
|
|---|
| |