Gene A2cp1_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_2435 
SymbolrpsA 
ID7300095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp2693050 
End bp2694756 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content66% 
IMG OID643595238 
Product30S ribosomal protein S1 
Protein accessionYP_002492839 
Protein GI220917535 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.411435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAATC AGACTCCCCG CACGCCCGAC GTCGAGACCG AGGACTTCGC GACGCTCTTC 
GCCGCGAGCG AAGCCAGCGC CGGTCCGATC GAGGAGGGCA AGGTCGTCAA CGGCACCGTC
ATCCAGCTGA CCAAGGACTA CGCCGTCATC GACATCGGCT ACAAGTCCGA AGGCCAGGTG
CCCATCTCCG AGTTCTCGAC CGCCCCCGGC GGCGAGCCCG CGGTGAAGGT GGGCGACAAG
GTCGAGGTGC TCGTCGAGTC CCGGGAGAAC GACACCGGGA TGGTCGTCCT CTCCAAGGAG
AAGGCCGACA AGATGCGCAT CTGGGACGAG ATCTCCGCCG CGTGCGAGCG CGACGAGCTC
GTCGAGGGCG TGATCGTCGG GCGCGTGAAG GGCGGCCTCT CCGTCGACAT CGGCGTGAAG
GCGTTCCTCC CCGGTTCGCA GGTCGACATC CGGCCGGTCC GGAACCTGGA CAAGCTGATC
GGCGAGAAGT TCAAGTTCAA GGTCATCAAG TTCAACAAGA AGCGCGGGAA CATCGTCCTG
TCGCGCCGGG TCCTCCTCGA GAAGGAGCGC GAGGAGCTGA AGAAGGAGAC CCTGAAGAAC
CTGAAGGAGG GCGCGATCCT CAAGGGCGTG GTCAAGAACC TCACCGACTA CGGCGCGTTC
ATCGACCTGG GCGGCATCGA CGGCCTGCTG CACGTCACCG ACATGAGCTG GGGCCGCATC
GGCCACCCGT CGGAGATGTT CGAGGTCGGC CAGGAGGTCC GCGTCGTCGT CCTGAAGTTC
GACCCGACCT CCGAGCGCGT CAGCCTGGGC CTGAAGCAGA TCCAGGAGGA CCCGTGGCAC
CGCGCCGACG AGAAGTATCC GGTCGGCACG CGCGTCAAGG GCAAGGTGGT CTCGCTCACC
GACTACGGCG CGTTCATCGA GCTGGAGCAG GGCGTCGAGG GCCTCGTCCA CGTCTCGGAG
ATGAGCTGGA CGAAGCGGGT GAAGCACCCC TCGAAGCTGG TCAACGTGGG CGATCAGGTC
GAGGCGGTGG TGCTCGACAT CGACCCGAAG GCCAAGCGGA TCAGCCTCGG CATGAAGCAG
ATCGAGGCGA ACCCCTGGAC GCTGCTCGAG GACAAGTATC CGATCGGCAC GACGATCCGC
GGCGAGGTCC GCAACGTCAC CGACTTCGGC ATCTTCGTGG GCGTCGAGGA GGGCATCGAC
GGCCTCGTGC ACGTGTCCGA CATCTCCTGG ACCGAGCGCA TCAAGCACCC GGGCGAGAAG
TTCAAGAAGG GTGACGTGGT CGAGGCGGTG GTGCTCAACA TCGACGTCGA GAACGAGCGC
TTCAGCCTCG GCATCAAGCA GGCGCACGTC GACCCGTGGA CCACGCTCTC CGAGCGGCAC
CCGGTGGGCG CCCGCGTGAA GGGCCGCGTC ACCAAGGTCA CCGACTTCGG CGCGTTCGTG
GAGATCGAGC CGGGCATCGA GGGCCTGGTG CACGTGTCCG AGATGAAGGA CGAGCGCGTG
GAGAACCCGC GCGACGTCGT GCAGGAGGGC CAGGAGGTCG AGGTCAAGGT CATCGACATG
GACCTCCAGG ACCGCAAGGT CGCCCTCTCC ATGAAGGCGG TCAACCGCGA CGGCGGCGAG
GACGACTACC GCGAGTACCT GCGCCGCCAG GGCGACGGCC GCGCCCGCCT CGGCGACCTG
ATGGAGAAGT TCAACCGCCG CAAGTAG
 
Protein sequence
MENQTPRTPD VETEDFATLF AASEASAGPI EEGKVVNGTV IQLTKDYAVI DIGYKSEGQV 
PISEFSTAPG GEPAVKVGDK VEVLVESREN DTGMVVLSKE KADKMRIWDE ISAACERDEL
VEGVIVGRVK GGLSVDIGVK AFLPGSQVDI RPVRNLDKLI GEKFKFKVIK FNKKRGNIVL
SRRVLLEKER EELKKETLKN LKEGAILKGV VKNLTDYGAF IDLGGIDGLL HVTDMSWGRI
GHPSEMFEVG QEVRVVVLKF DPTSERVSLG LKQIQEDPWH RADEKYPVGT RVKGKVVSLT
DYGAFIELEQ GVEGLVHVSE MSWTKRVKHP SKLVNVGDQV EAVVLDIDPK AKRISLGMKQ
IEANPWTLLE DKYPIGTTIR GEVRNVTDFG IFVGVEEGID GLVHVSDISW TERIKHPGEK
FKKGDVVEAV VLNIDVENER FSLGIKQAHV DPWTTLSERH PVGARVKGRV TKVTDFGAFV
EIEPGIEGLV HVSEMKDERV ENPRDVVQEG QEVEVKVIDM DLQDRKVALS MKAVNRDGGE
DDYREYLRRQ GDGRARLGDL MEKFNRRK