Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_2407 |
Symbol | clpX |
ID | 7300066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 2668031 |
End bp | 2669314 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643595209 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_002492811 |
Protein GI | 220917507 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.279555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCCGGA AAGAGCATCA CCACGGAAAC CTGTCCTGCT CGTTCTGCGG CAAGGGCCAG CGGGAGGTCC GCAAGCTCAT CGCGGGGCCC ACGGTCTACA TCTGCGACGA GTGCATCCGC CTCTGCAACG ACATCATCGC GGAGGAGGCC GAGCGGGACG AGGGCCGTCC GGCCGTCTCG CTGCCCACCC CGGCCGAGAT CAAGAGCTTC CTCGACGATT ACGTGGTCGG CCAGGACCGC GCCAAGAAGG TCCTCTCGGT CGCGGTCTAC AACCACTACA AGCGCGTCTA CTCCCGCAAG CCCGCCCGGC CGGCGCGCCC GGGGCAGGCG CGCGCGGCGC AGGACGACGT CGAGCTGCAG AAGTCGAACA TCCTGCTCAT CGGGCCCACC GGCTCGGGCA AGACGCTGCT GGCGCAGTCG CTGGCGCGCT TCCTCAACGT TCCGTTCACC ATCGCCGACG CGACCAGCCT CACCGAGGCG GGCTACGTGG GCGAGGACGT CGAGAACATC ATCCAGAACC TGCTGCACAA CGCCGACTAC GACGTGGAGA AGGCGTCGCG CGGCATCGTC TACGTCGACG AGATCGACAA GATCGCGCGC AAGGGTGACA CGCCCTCGCC GACCCGCGAC GTGGGCGGGG AAGGCGTCCA GCAGGCGCTC CTCAAGATCA TCGAGGGCAC GCGCGCCAAC GTCACCCCGC GAGGCGGCAA GAAGTACAAC CAGCAGGAGT ACATCCAGGT CGACACCTCG AACGTGCTCT TCATCGTCGG CGGCGCGTTC TGCGGGCTGG AGCAGGTGAT CCGCCGGCGC GTGGGCGTGA AGGGGCTCGG CTTCGGGGCC AAGATCGAGC GCAAGGAGGA GGCTAGCCTG GGCGAGCTGC TCGCGCGGGT GGAGCCCGGC GACCTGGTGC GCTTCGGGAT GATCCCCGAG TTCGTCGGCC GCCTGCCCAT CATCGCGACG CTGTCCGATC TGAGCGAGGA CGACCTCGTC ACCATCCTCA CGCAGCCGAA GAACGCGCTC ACGAAGCAGT ACATCAAGCT CTTCGACCTG GAGAAGGTGA AGCTCTCCTT CACCAAGGAG TCGCTGCGGG CGACCGCCCG CGAGGCGATG CGGCGCAAGT CGGGCGCGCG CGGCCTGCGC GCCATCCTCG AGCAGGCCAT GCTCGACATC ATGTACGACG TGCCGTACCG GGAAGGCGTG AAGGAGTGCA AGATCACCGA GGGTGTGATC GTCAACCGGG AGCCGCCGCT CCTGAGCTTC GAGAAGGAGA AGCGGACCGC CTGA
|
Protein sequence | MSRKEHHHGN LSCSFCGKGQ REVRKLIAGP TVYICDECIR LCNDIIAEEA ERDEGRPAVS LPTPAEIKSF LDDYVVGQDR AKKVLSVAVY NHYKRVYSRK PARPARPGQA RAAQDDVELQ KSNILLIGPT GSGKTLLAQS LARFLNVPFT IADATSLTEA GYVGEDVENI IQNLLHNADY DVEKASRGIV YVDEIDKIAR KGDTPSPTRD VGGEGVQQAL LKIIEGTRAN VTPRGGKKYN QQEYIQVDTS NVLFIVGGAF CGLEQVIRRR VGVKGLGFGA KIERKEEASL GELLARVEPG DLVRFGMIPE FVGRLPIIAT LSDLSEDDLV TILTQPKNAL TKQYIKLFDL EKVKLSFTKE SLRATAREAM RRKSGARGLR AILEQAMLDI MYDVPYREGV KECKITEGVI VNREPPLLSF EKEKRTA
|
| |