Gene A2cp1_2267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_2267 
Symbol 
ID7299233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp2518072 
End bp2518662 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content75% 
IMG OID643595063 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002492671 
Protein GI220917367 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0916495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTCCCT CACTGTCCGG CGAGGCCGCG TGGACGCGGG CGGCCGCGCG AGGCGACCGG 
CAGGCCTTCT CACGGCTGGT GGACCTGCAC AAGCGCACGG TGTTCGCCCT CTGCGTCCGG
CTGCTGCGGG ACCAGGACGA GGCGCAGGAC GCCGCCCAGG AGGCGTTCGC GCGCGCCTAC
GCGAGCCTGG CCGCGTTCGA TGCCTCGCAG CCGTTCGCGC CCTGGCTGCT GCGCATCGCC
CGCAACCACT GCCTCGACGT GCTCCGCCGG CGCCTGCCGC AGGCGCAGCG GGTCGAGCTG
GACGCGGACC CGGAGGACGG CGCGCCGCGC GACCTCGCCG ACCCGGACGC GCCCCGCGGC
GACGACGCGC TGGAGCGCCG CGAGCTGGCG CGCACGATCG AGGCCGCGGT CGCGGCCCTG
CCGGCGAACT ACCGCGAGGT CGTGCACCTC TTTCACGTGG AGCACCTCTC CTACAAGGAG
ATCGCCGCCG CCATGGACGT CCCCATCGGC ACCGTGATGA CCTGGCTGCA CCGCGCCCGC
GCGCGGCTCA AGGCGACCCT CGACGCGAGC GCCCCGGAGA TCACGCCATG A
 
Protein sequence
MGPSLSGEAA WTRAAARGDR QAFSRLVDLH KRTVFALCVR LLRDQDEAQD AAQEAFARAY 
ASLAAFDASQ PFAPWLLRIA RNHCLDVLRR RLPQAQRVEL DADPEDGAPR DLADPDAPRG
DDALERRELA RTIEAAVAAL PANYREVVHL FHVEHLSYKE IAAAMDVPIG TVMTWLHRAR
ARLKATLDAS APEITP