Gene A2cp1_2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_2045 
Symbol 
ID7300172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand+ 
Start bp2286382 
End bp2287404 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content66% 
IMG OID643594840 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_002492452 
Protein GI220917148 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0192921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGATC CGATCGTCAC GAAGAACTGG CGGGACCTCA TCAAGCCCCG CGGCCTGGTC 
GTCGACCAGG ACAGCCTCTC GAACACCTAC GGGAAGTTCG TCGCGGAGCC GCTCGAGCGG 
GGCTTCGGCA TCACCCTCGG CAACTCGCTC CGGCGCGTGC TGCTCTCGAG CCTGCAGGGC 
GCCGCGATCA CCTCGGTGAA GGTCGAGGGC GTCGAGCACG AGTTCATGAC CATCCCCGAG 
GTGGCCGAGG ACGTCACCGA CATCATCCTC AACCTCAAGG AAGTGCTGCT CCAGATCCAC 
ACCAACGACG TGAAGACGAT CCGGATCGAG GCGGACGGCC CGAAGGAGAT CAAGGCCGGC 
GACCTCATCA CGGACGCGCA GGTCGAGGTG CTGAACCCGG GCCACCACAT CCTCACCATC 
AGCGAGGGCG GGCGGGTCCG CGCCGAGATG ACCGCGCGCC GCGGCCGCGG CTACGTGCCG 
GCCGAGCGGA ACAAGATCCC CGGCTCGCCG ATCGGCACCA TCCCCATCGA CGCGCTCTTC 
AGCCCCATCC GCAAGGTGAA CTACCAGGTC ACCAACGCGC GCGTCGGGCA GCAGACCGAC 
TACGACAAGC TGACGCTCGA GGTCTGGACC GACGGCTCGG TCGCCCCGGC CGACGCGGTC 
GCCTTCGCCG CGAAGATCGT GAAGGAGCAG CTCTCGATCT TCATCAACTT CGACGAGGCG 
GAGGAGCCGG CCGAGGAGAT CAAGCCGGTC GAGGAGCAGA AGCTGAACGA GAACCTCTTC 
CGCTCGGTGG ACGAGCTGGA GCTCTCGGTC CGCAGCGCGA ACTGCCTGCA GAACGCGAAC 
ATCAAGACCA TCGGCGACCT CGTTCAGAAG ACCGAGGCCG AGATGCTCAA GACGAAGAAT 
TTCGGCCGGA AGTCGCTGAA GGAGATCAAG GAGATCCTGG CCGAGATGGG CCTCTCCCTC 
GGCATGAAGC TCGAGAACTG GCCGCCGAAG GCGGCGCCGC AGGGCGGCGC GCCCAAGGTC 
TAG
 
Protein sequence
MVDPIVTKNW RDLIKPRGLV VDQDSLSNTY GKFVAEPLER GFGITLGNSL RRVLLSSLQG 
AAITSVKVEG VEHEFMTIPE VAEDVTDIIL NLKEVLLQIH TNDVKTIRIE ADGPKEIKAG 
DLITDAQVEV LNPGHHILTI SEGGRVRAEM TARRGRGYVP AERNKIPGSP IGTIPIDALF 
SPIRKVNYQV TNARVGQQTD YDKLTLEVWT DGSVAPADAV AFAAKIVKEQ LSIFINFDEA 
EEPAEEIKPV EEQKLNENLF RSVDELELSV RSANCLQNAN IKTIGDLVQK TEAEMLKTKN 
FGRKSLKEIK EILAEMGLSL GMKLENWPPK AAPQGGAPKV