Gene A2cp1_2044 details

Gene Information

• Locus tag: A2cp1_2044
• Symbol: rpsD
• ID: 7300171
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: +
• Start bp: 2285567
• End bp: 2286193
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643594839
• Product: 30S ribosomal protein S4
• Protein accession: YP_002492451
• Protein GI: 220917147
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0881453
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCCGTT ACAGCGAAAG CGTCTGCCGG CTCTGCCGCC GGGAAAACCT CAAGATGTAT 
CTCAAGGGCG ATCGGTGCTA CACCGACAAG TGCGCCATCG AGCGCCGCCC GTATCCTCCC 
GGCCAGCACG GCCAGGGCCG GACCAAGTTC TCCGAGTACG GCGTCCAGCT CCGCGAGAAG 
CAGAAGGTGA AGCGGATGTA CGGCCTGCTC GAGGCCGGGT TCCGTCACGC CTACCAGAAC 
GCGGCGGCCG CCAAGGGCAA GACCGGCGAG AACCTGCTGC AGACCCTCGA GCTCCGGCTC 
GACAACGTGG TCTTCCGGCT CGGCTTCGCG GACACCCGCA ACGAGGCCCG GCAGCTCGTC 
CGCCACGGCC ACTTCAAGGT GAACGGCCGC AAGGTCAACA TCCCCAGCTA CCTGTGCCGG 
CCCGGCGACA AGGTGGAGCT GAAGGACCGC TCGAAGAAGG TGGTCCGGAT CACCGAGGCG 
CTCGAGGCGG TGGACCGCCG CGGCGTGCCG GCGTGGCTCG ACCTGGACAA GGGCGGCTTC 
AAGGGCACCG TGAAGACCTC GCCGGCGCGC GAGGACATCA CCATGCCGAT CCAGGAGCAG 
CTGATCGTCG AGCTGTACTC GAAGTAG 

 

Protein sequence

MARYSESVCR LCRRENLKMY LKGDRCYTDK CAIERRPYPP GQHGQGRTKF SEYGVQLREK 
QKVKRMYGLL EAGFRHAYQN AAAAKGKTGE NLLQTLELRL DNVVFRLGFA DTRNEARQLV 
RHGHFKVNGR KVNIPSYLCR PGDKVELKDR SKKVVRITEA LEAVDRRGVP AWLDLDKGGF 
KGTVKTSPAR EDITMPIQEQ LIVELYSK