Gene A2cp1_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_1997 
Symbol 
ID7300124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand+ 
Start bp2251997 
End bp2252386 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content70% 
IMG OID643594792 
Productqueuosine biosynthesis protein QueD 
Protein accessionYP_002492404 
Protein GI220917100 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.510803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCCA TCGACTACAC CGACCGCCGG CGCATGCGGC TCGACGTCGA GTTCTACTTC 
GCCGCCGCGC ACCGCCTGCC GCGCTACGAG GGCCCGTGCT TCCGCATGCA CGGCCACAAC 
TACCGGTTCT TCGTCGCCCT GGAGGGCGAG GTCGATCCCG CGACCGGGAT GATCGCCGAC 
TTCGGGGACG TGAAGCGGAT CGTGCAGGAG CACGTGCTCG CGCGCGTGGA CCACCGCACG 
CTGAACGACG TCCTCGACAA CCCCACCGCC GAGAACATCG CCCGCTGGGT GTGGGAGGTG 
CTCGAGCCGC ACCTGCCCGG CCTGTGCGAG ATCCGGCTCT ACGAGATCCC GGACTCGTGC 
GTGACGTACC GGGGGCCGGG TGGCCGCTAG
 
Protein sequence
MAPIDYTDRR RMRLDVEFYF AAAHRLPRYE GPCFRMHGHN YRFFVALEGE VDPATGMIAD 
FGDVKRIVQE HVLARVDHRT LNDVLDNPTA ENIARWVWEV LEPHLPGLCE IRLYEIPDSC 
VTYRGPGGR