Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_1975 |
Symbol | rplC |
ID | 7296630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 2229545 |
End bp | 2230255 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643594769 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_002492382 |
Protein GI | 220917078 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACGG GACTGCTGGC GAAGAAGGTT GGGATGACGC AGATCTTCAC CCCCGAGGGT GACTGCGTCC CGGTGACGGT GCTCGAGGCG GGCCCGTGCA CGGTGGTGCG GCGCAAGACG GCGGAGAAGG ACGGCTACGA CGCCGTCGTG ATCGGCTTCG GCGTGGTGGA CGAGAAGCAC GCCCACCGCC TCTCCAAGCC CGAGGTCGGC GTCTTCAAGA AGGCCGGCAC GCCCATCTTC CGCCACGTGA AGGAGATCCG CGTGAAGGAC GCCAAGCAGC TCGGCGACCT CAAGGCGGGC GACGTCCTCA CCGTGGACAA GGTCTTCAAG GCGAACCAGC GGATCGACGT CGCCGGCGTC ACGAAGGGCC GCGGCTTCAC CGGCGTCATG AAGCGCTGGA ACATGAAGGG CGCCGCGCGC GACAGCTCCA CCGCGCACGA GCACCACCGC CACGTCGGCG CGATCGGCCA GCGCAAGACG CCGGGCAAGG TGTGGAAGGG CAAGCACCTC CCCGGCCACT ACGGCGTGGA CAACGTCACC ATCCAGAACC TGACCGTGGT CGGCATCGAG GCCGAGCAGA ACGTGCTGCT CGTGTCCGGC GCGGTCCCCG GCCACGCCGA CGGCTTGCTG TTCGTGAACA CCGCGGCGAA GGGCCAGCCG CGGATCAAGC AGAAGCAGGA GGTCCGCGAG CGCGCCAAGC CGAAGGTGTA G
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Protein sequence | MSTGLLAKKV GMTQIFTPEG DCVPVTVLEA GPCTVVRRKT AEKDGYDAVV IGFGVVDEKH AHRLSKPEVG VFKKAGTPIF RHVKEIRVKD AKQLGDLKAG DVLTVDKVFK ANQRIDVAGV TKGRGFTGVM KRWNMKGAAR DSSTAHEHHR HVGAIGQRKT PGKVWKGKHL PGHYGVDNVT IQNLTVVGIE AEQNVLLVSG AVPGHADGLL FVNTAAKGQP RIKQKQEVRE RAKPKV
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