| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1953 |
|---|
| Symbol | |
|---|
| ID | 7296608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 2207821 |
|---|
| End bp | 2208363 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643594748 |
|---|
| Product | peptidase zinc-dependent |
|---|
| Protein accession | YP_002492361 |
|---|
| Protein GI | 220917057 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1913] Predicted Zn-dependent proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.885912 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGA TCTTCATCTG GTGGATCGGC GAGGCGGCGC CCGACCGGGC GCTGCTGGAC
CACGCCGCGC TGCACCTGGC CCGCGCCTTC GGGCGCCCGG TGCAGGAGTG GACCTCGCCG
GAGCGCCCGC GCCACGCCTA CGACCCGAAG CGCAAGCAGC ACCTCTCCGG CGCGATCCTG
AAATGGCTGC TGGAGGCGGG GCCGGGCGCC GGGAAGGTGC TCGGGGTGAC CGACCGCGAC
CTGTTCATCC CCATCCTCAC CTACGTGTTC GGGGAGGGGC AGCTCGGGGG CGGCGCGGCG
GTCGTCTCCA CCGCGCGGCT GCTGGAGGAC GTCGAGCTGA TCGGGCCGCA GCTGCTGCTG
GAGCGGCTCG CCAAGGAGGC GGTGCACGAG GTCGGGCACG CGTTCGGCCT GCTGCACTGC
GCGACGCCGG TGTGCGTGAT GGCGCGCTCG TCGGGCGTTC GCAACGTGGA CGAGAAGATG
CCGGAGCTCT GCTCCGAGTG CCGACGCAGG CTCGAGGAGC TGCAGGCCGG AGGTCCCAGG
TGA
|
|---|
| Protein sequence | MDPIFIWWIG EAAPDRALLD HAALHLARAF GRPVQEWTSP ERPRHAYDPK RKQHLSGAIL
KWLLEAGPGA GKVLGVTDRD LFIPILTYVF GEGQLGGGAA VVSTARLLED VELIGPQLLL
ERLAKEAVHE VGHAFGLLHC ATPVCVMARS SGVRNVDEKM PELCSECRRR LEELQAGGPR
|
|---|
| |