| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1946 |
|---|
| Symbol | |
|---|
| ID | 7296601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 2200914 |
|---|
| End bp | 2201822 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643594741 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002492354 |
|---|
| Protein GI | 220917050 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.652063 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATGGC TGAACTACCA TCACCTCTTC TACTTCTGGA CGGTGGCCCG CGCCGGCAGC
ATCGCGCGCG CCAGCGAGGA GCTGCGGCTC GCGCAGCCCA CCATCTCGAA CCAGCTCAAG
ACGCTGGAGG CGAACCTCGG GGTGAAGCTC CTGGAGCGGC AGGGGCGGCG GCTCGTCCTC
ACCGACGTGG GACGGACCGT GCTCCGCTAC GCGGACGACA TCTTCCGGAC CGGGCGCGAG
CTGCAGCGGG CGGTGAAGGG CCTCCCCACC GGCCAGCGGC TTCGCCTGGT GGTCGGCGTG
GCCGACGTGA TCCCGAAGCG CATGGCCGCG CTGCTGCTGC AGCCGGCGGT GGACGCGCAC
CCGGACCTGA CGCTGGTCTG CCGCGAGGGC CCGCTGCCGC AGCTGCTCGC GGCGCTGGCG
CTGCACGAGC TCGACGTCGT CATCGCCGAC GTCCCCGCGC CGGAGGACGT GAAGGTGAAG
GCGTTCAGCC ACCGGCTCGG CGACTGCGGG ACCTCGTTCC TGGCGGCGCG GCCGCTCGCG
CATCTCAAGA AGGGCTTCCC GCGGTCGCTC CAGGCCGCGC CCATGCTCCT GCCGTCGGAG
GGCACCGCGC TCCGGCGCGG GCTCGACACC TGGCTCGAGC GCACCGGCGT GCGCCCGGTG
GTCGCGGGCG AGTTCGACGA CAGCGCGCTC ATGCAGGCGT TCGGCGCGCG CGGGCTGGGC
GTGTTCGCCG CCCCGCGCGT GCTGGAGGAC GACATCCGCT CGCAGCTCGA GGTGGGCGTG
ATCGGGCGGG CCGAGGACGT GCGCGAGGCC TACCACGCGA TCACCGTGGA GCGCCGGCTG
CGCCACCCGG CGGTGGTCAC CCTGGCCGAG GCGGCGCGCG ACGCGATCTT CGGCGCGCCG
CAGGCCTGA
|
|---|
| Protein sequence | MEWLNYHHLF YFWTVARAGS IARASEELRL AQPTISNQLK TLEANLGVKL LERQGRRLVL
TDVGRTVLRY ADDIFRTGRE LQRAVKGLPT GQRLRLVVGV ADVIPKRMAA LLLQPAVDAH
PDLTLVCREG PLPQLLAALA LHELDVVIAD VPAPEDVKVK AFSHRLGDCG TSFLAARPLA
HLKKGFPRSL QAAPMLLPSE GTALRRGLDT WLERTGVRPV VAGEFDDSAL MQAFGARGLG
VFAAPRVLED DIRSQLEVGV IGRAEDVREA YHAITVERRL RHPAVVTLAE AARDAIFGAP
QA
|
|---|
| |