Gene A2cp1_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_1942 
Symbol 
ID7296597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp2196584 
End bp2197702 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content79% 
IMG OID643594737 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002492350 
Protein GI220917046 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.547654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCC CCCGCGCCGC GCCGCTCGCG CTCACCCTCC TCGCGCTCGC CGCCGCCTGC 
GGGCGGGGCG ACGCCGGACC GAAGGGCCCG CGCCCGGTGG CGGTTCGCGC CGCCGTGGCG
GAGCGGCGCG ACGTGCCGGT GGAGGTCCGC GCCGTCGGGC GCATCGTGGC GAACCAGTCG
GTGGCGGTGC GCGCGCAGGT GTCGGGCCCC ATCGTCGCGG TGCGCTTCAC CGAGGGCCAG
GCGGTGCGCC AGGGCGACGT GCTGCTCGAG CTCGACCCGC GCCCGTACCG CGCCGCGCTG
GACGAGGCGC GGGCTCGCCT CGCGCAGGAC GAGGCGCGCG CCGCGAGCGC CCGGGACGAC
GCGCGCCGGT TCGCCGAGCT GGTGAAGAAG GAGTACGTCA CGCAGCAGCA GGCCGAGCAG
GCGGCGGCGG CCGCGACGGC CGCCGCGGCG GCGGTGGCGG GCGACCGCGC GCAGGTGGAG
CGGGCCGCGC TCGACCTCTC CTACTGCACC GTCCGCGCGC CGGCGGCGGG CCGCACCGGC
CGCCTGCTCG TGCACGCCGG CAACCTCGTC ACCGCGTCGG CGCAGACGCC GCTGCTCACC
ATCGAGCAGG TGAAGCCGGT GTACGCGGCC TTCTCCATCC CGGAGCGCCA CCTCCCGGCG
CTGCAGGGCT GGCGCGCCCA CCCGCCGGCG GTGCGCGTGC GCGCAGGCGA CGGGCCCGAG
ATCGCGGGCG TGCTCGACTT CGTGGACAAC GCGGTGGACG CCGGCACCGG CACCATCCTG
CTCAAGGCGC GCCTCGCCAA CGCGGACGAG GCGCTCTGGC CCGGGCAGGT GGTGGACGTC
GCGCTCCGGA TCGGCGAGCG GCGCGGCGCG GTGGTGGTGC CGGCCGCCGC GGTCGCGCAG
GGCCAGCAGG GCGATTACGC CTACGTGGTC GGCGCGGACG GGAAGGCCGA GCTGCGCGGG
GTGACGGTGG AGCAGGCGGG CGACGCCGAG GCGGTGCTCT CGAAGGGAAT CGCGCCCGGC
GAGCGGGTGG TGATCGAGGG CCAGCTGAAG CTGCGGCCGG GCGCGCCGGT GGAGGTGCAG
GGGCCGCGCG AGGACGGGCG GAAGGCGCCG GGCACATGA
 
Protein sequence
MTAPRAAPLA LTLLALAAAC GRGDAGPKGP RPVAVRAAVA ERRDVPVEVR AVGRIVANQS 
VAVRAQVSGP IVAVRFTEGQ AVRQGDVLLE LDPRPYRAAL DEARARLAQD EARAASARDD
ARRFAELVKK EYVTQQQAEQ AAAAATAAAA AVAGDRAQVE RAALDLSYCT VRAPAAGRTG
RLLVHAGNLV TASAQTPLLT IEQVKPVYAA FSIPERHLPA LQGWRAHPPA VRVRAGDGPE
IAGVLDFVDN AVDAGTGTIL LKARLANADE ALWPGQVVDV ALRIGERRGA VVVPAAAVAQ
GQQGDYAYVV GADGKAELRG VTVEQAGDAE AVLSKGIAPG ERVVIEGQLK LRPGAPVEVQ
GPREDGRKAP GT