Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_1942 |
Symbol | |
ID | 7296597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 2196584 |
End bp | 2197702 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 643594737 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002492350 |
Protein GI | 220917046 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.547654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCC CCCGCGCCGC GCCGCTCGCG CTCACCCTCC TCGCGCTCGC CGCCGCCTGC GGGCGGGGCG ACGCCGGACC GAAGGGCCCG CGCCCGGTGG CGGTTCGCGC CGCCGTGGCG GAGCGGCGCG ACGTGCCGGT GGAGGTCCGC GCCGTCGGGC GCATCGTGGC GAACCAGTCG GTGGCGGTGC GCGCGCAGGT GTCGGGCCCC ATCGTCGCGG TGCGCTTCAC CGAGGGCCAG GCGGTGCGCC AGGGCGACGT GCTGCTCGAG CTCGACCCGC GCCCGTACCG CGCCGCGCTG GACGAGGCGC GGGCTCGCCT CGCGCAGGAC GAGGCGCGCG CCGCGAGCGC CCGGGACGAC GCGCGCCGGT TCGCCGAGCT GGTGAAGAAG GAGTACGTCA CGCAGCAGCA GGCCGAGCAG GCGGCGGCGG CCGCGACGGC CGCCGCGGCG GCGGTGGCGG GCGACCGCGC GCAGGTGGAG CGGGCCGCGC TCGACCTCTC CTACTGCACC GTCCGCGCGC CGGCGGCGGG CCGCACCGGC CGCCTGCTCG TGCACGCCGG CAACCTCGTC ACCGCGTCGG CGCAGACGCC GCTGCTCACC ATCGAGCAGG TGAAGCCGGT GTACGCGGCC TTCTCCATCC CGGAGCGCCA CCTCCCGGCG CTGCAGGGCT GGCGCGCCCA CCCGCCGGCG GTGCGCGTGC GCGCAGGCGA CGGGCCCGAG ATCGCGGGCG TGCTCGACTT CGTGGACAAC GCGGTGGACG CCGGCACCGG CACCATCCTG CTCAAGGCGC GCCTCGCCAA CGCGGACGAG GCGCTCTGGC CCGGGCAGGT GGTGGACGTC GCGCTCCGGA TCGGCGAGCG GCGCGGCGCG GTGGTGGTGC CGGCCGCCGC GGTCGCGCAG GGCCAGCAGG GCGATTACGC CTACGTGGTC GGCGCGGACG GGAAGGCCGA GCTGCGCGGG GTGACGGTGG AGCAGGCGGG CGACGCCGAG GCGGTGCTCT CGAAGGGAAT CGCGCCCGGC GAGCGGGTGG TGATCGAGGG CCAGCTGAAG CTGCGGCCGG GCGCGCCGGT GGAGGTGCAG GGGCCGCGCG AGGACGGGCG GAAGGCGCCG GGCACATGA
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Protein sequence | MTAPRAAPLA LTLLALAAAC GRGDAGPKGP RPVAVRAAVA ERRDVPVEVR AVGRIVANQS VAVRAQVSGP IVAVRFTEGQ AVRQGDVLLE LDPRPYRAAL DEARARLAQD EARAASARDD ARRFAELVKK EYVTQQQAEQ AAAAATAAAA AVAGDRAQVE RAALDLSYCT VRAPAAGRTG RLLVHAGNLV TASAQTPLLT IEQVKPVYAA FSIPERHLPA LQGWRAHPPA VRVRAGDGPE IAGVLDFVDN AVDAGTGTIL LKARLANADE ALWPGQVVDV ALRIGERRGA VVVPAAAVAQ GQQGDYAYVV GADGKAELRG VTVEQAGDAE AVLSKGIAPG ERVVIEGQLK LRPGAPVEVQ GPREDGRKAP GT
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