| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1801 |
|---|
| Symbol | |
|---|
| ID | 7298541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 2014309 |
|---|
| End bp | 2015724 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643594596 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002492209 |
|---|
| Protein GI | 220916905 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.162476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC CCGCGTCCAC CTACCCCTCC TTCGCCGTGC TGCTGGTGGA CGACGAGGCG
GCCTGGCTGC GCTCCATGCG CGTGGCGCTG CAGCGCGCCG GGGTGGACCA CGTGCTCGCG
ACGCAGGAGC CGCGCGAGGT CCCGGAGCTC CTGGCGCGCG AGCCGGTGGG TCTCGTGCTG
CTCGACCTCA ACATGCCCCA CCTCTCCGGC GAGGCGCTGC TCGAGCGGCT CGCGGCGGAG
CGGCCCGAGG TCGCGGTGAT CGTCATCAGC GGCATGAACC AGGTCGAGAC GGCGGTGCGC
TGCGTGAAGG CCGGGGCGCT CGACTACTAC GTGAAGACCG CCGAGGAGGA CCGGCTGGTG
GGCGGCGTGC TGCGCGCCAT CCGCCTGCTC GAGCTGCAGC GCGAGAACCG CGAGATGGCG
AGCCGGTTCC TCTCCGGCGA CCTCCGCCAC CCGGAGGCCT TCGCCGGGCT CGTCACCCAG
GACCGCGCCA TGCTGGCGAT CTTCTCCTAC GTGGAGGCGG TGGCGCGCAG TCCGCAGCCC
CTGCTCGTCC AGGGCGAGAG CGGGTCGGGC AAGGAGCTCG TGGCGCGCGC TGCGCACCAG
GTCTCGGGCC GGCGCGGGCC GCTCGTGGCG GTGAACGTGG CCGGGCTCGA CGACACGGTG
TTCGCCGACA CGCTGTTCGG CCACGCCCGC GGCGCGTTCA CCGGCGCCGA GCAGGCGCGC
CGGGGCATGG TGGAGGAGGC GGCCGACGGG ACGCTGTTCC TCGACGAGAT CGGCGACCTC
TCGCAGGCGT CGCAGGTGAA GCTGCTCCGG CTGCTGCAGG AGGGCGAATA CTTCCCGCTC
GGCAGCGACC GGCCGAAGCG GCTGCTGGCG CGCGTGATCG TGGCGACGCA CCACGACCTC
GCGGCCCGGC AGGCGGCGGG CACGTTCCGG CGGGACCTCT ACTACCGGCT CGCCACGCAC
CAGGTGCGCA TCCCGCCGCT GCGCGAGCGC CGCGGCGACC TCCCGCTGCT GCTCGACCAC
TTCCTCGCCG AGGCGGCGCG CGAGCTCGGG AAGAAGCGGC CCACCCCGCC CAGGGAGCTC
GTGCCGCTGC TCGGCAGCTA CGCGTTCCCC GGCAACGTGC GCGAGCTGCG CTCGATGGTG
CTCGACGCGG TGAGCCTGCA CCGCGAGCGC GTGCTCTCCA TGGACGCGTT CGTGAAGGCC
ATGGCCCGCG GGGGCGCGGC GGCGCCCGCG CCGGGGGCCC TCCCGGACCG GAACCCGTTC
GCCGTGGCCG AGCACCTGCC CACCATCCAC GACGCGGTCG AGCTGCTGGT CGAGGAGGCG
CTCTCGCGCG CCGGCGGCAG CCAGACCATC GCGGCGCGCA CGCTCGGCAT CACCCAGTCG
GCGCTCTCGA AGCGGCTCAA GGCCGCGCGC GAGTGA
|
|---|
| Protein sequence | MSEPASTYPS FAVLLVDDEA AWLRSMRVAL QRAGVDHVLA TQEPREVPEL LAREPVGLVL
LDLNMPHLSG EALLERLAAE RPEVAVIVIS GMNQVETAVR CVKAGALDYY VKTAEEDRLV
GGVLRAIRLL ELQRENREMA SRFLSGDLRH PEAFAGLVTQ DRAMLAIFSY VEAVARSPQP
LLVQGESGSG KELVARAAHQ VSGRRGPLVA VNVAGLDDTV FADTLFGHAR GAFTGAEQAR
RGMVEEAADG TLFLDEIGDL SQASQVKLLR LLQEGEYFPL GSDRPKRLLA RVIVATHHDL
AARQAAGTFR RDLYYRLATH QVRIPPLRER RGDLPLLLDH FLAEAARELG KKRPTPPREL
VPLLGSYAFP GNVRELRSMV LDAVSLHRER VLSMDAFVKA MARGGAAAPA PGALPDRNPF
AVAEHLPTIH DAVELLVEEA LSRAGGSQTI AARTLGITQS ALSKRLKAAR E
|
|---|
| |