| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1792 |
|---|
| Symbol | |
|---|
| ID | 7298532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 2001915 |
|---|
| End bp | 2003561 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643594587 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002492200 |
|---|
| Protein GI | 220916896 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGCC TCGACGCCAT CTCCAAGCAG CACGGCAACC AGCTCCTGTT CGTGGAGGCC
TCCGCCGTCG TCCACCGCGG CGAGAAGGTC GGCCTCGTCG GCCCGAACGG CGCGGGCAAG
TCCACCCTGT TCCGCCTGAT CACGCGCGAG GAGGCGCCGG ACGAGGGCCA GGTCTCCATC
GACCGCGGAG TGACCGTGGG TCACTTCTCG CAGGACGTCG GCGAGATGTC CGGCCGGACC
GCGCTCGCCG AGACCATGGA CGGCGCCGGC CCCGTGTCGG AGGTGGCCGC CGAGCTGCAC
GGGCTCGAGC AGGCGCTCGC GGATCCGGAG CGCGCGGACG AGCTGGAGGC GCTGGTCGAG
CGCTTCGGCC ACGTGCAGGC GCGCTTCGAC GAGCTGGGCG GGTACGCGCT CGAGGCCCGG
GCGCGGGAGA TCCTGGCCGG CCTCGGCTTC ACGCAGGAGA TGATGGACGG CGACGTCGGC
GCGCTCTCCG GCGGGTGGAA GATGCGCGTG GCGCTGGCGC GCATCCTGCT CATGCGGCCC
GACGCCATGC TCCTCGACGA GCCCTCCAAC CACCTCGACC TCGAGTCGAT CATCTGGCTG
GAGGAGTTCC TGCGCGGCTA CGAGGGCGCC ATCCTCATGA CCTCGCACGA CCGCGAGTTC
ATGAACCGCG TGGTCGGGAA GATCATCGAG ATCGACGCCG GCACGCTCAC CACCTACTCC
GGCGACTACG ACCTGTACGA GCGGGAGCGG GCCGTCGCCG ACCAGCACCA GCAGGCCGCG
TTCGACCGGC AGCAGGCGAT GCTGAAGAAG GAGCTCGCGT TCATCGAGCG GTTCAAGGCG
CGCGCCTCCC ACGCGGCGCA GGTGCAGTCG CGGGTGAAGA AGCTCGACAA GATCGAGAAG
GTCGAGCCGC CCAAGGTGAG GCGCACCGTC GACTTCGAGT TCCGGCCGCC GCCGCGGTCC
GGCGAGGACG TGGCGAAGCT GGCGGGCGTG GTGAAGCGGT ACGGCGAGCG CACCGTGTAT
GGCGGCCTCG ACTTCCTCGT CCGCCGCGGC GAGCGCTGGT GCGTGCTGGG CGCGAACGGC
GCCGGCAAGT CCACGCTGCT GCGGATGGTG GCCGGGGAGT CCACGCCCGA CGCCGGGTCG
GTGACCGTCG GCGGCAGCGT GAAGATGGGG TACTTCGCGC AGCACGCCAT GGAGCTGCTG
CGCGCCGAGG AGACGGTGTG GGACGCGCTG CAGCGCGCGT TCCCGCGCGC GTCGGTCGGA
TCGCTCCGGA CGCTGGCCGG CTGCTTCGGG TTCTCCGGCG ACGAGATCGA CAAGCGCTGC
AAGGTGCTCT CCGGCGGCGA GAAGGCGCGC CTCGTGCTCG CGACGCTGCT CTACGACCCG
CCCAACTTCC TCGTGCTCGA CGAGCCCACG AACCACCTCG ACGCCGCCAC CCGCGAGATG
CTCGTGCGGG CGCTCGCCGG CTACGAGGGA ACGCTCCTGT TCGTCTCGCA CGACCGCCGG
TTCCTGGCGT CCCTCTCGAA CCGCGTCCTC GAGCTCGGGC CCGATGGGCC CGTCCCGTAC
GGGGGCGGGT ACACCGAGTA CGTCGCCCGG ACCGGCCGCG AGGCCCCCGG CCTGCGGGCC
GCCCCCGGCC GCGCCGCGCG AGCCTAG
|
|---|
| Protein sequence | MIRLDAISKQ HGNQLLFVEA SAVVHRGEKV GLVGPNGAGK STLFRLITRE EAPDEGQVSI
DRGVTVGHFS QDVGEMSGRT ALAETMDGAG PVSEVAAELH GLEQALADPE RADELEALVE
RFGHVQARFD ELGGYALEAR AREILAGLGF TQEMMDGDVG ALSGGWKMRV ALARILLMRP
DAMLLDEPSN HLDLESIIWL EEFLRGYEGA ILMTSHDREF MNRVVGKIIE IDAGTLTTYS
GDYDLYERER AVADQHQQAA FDRQQAMLKK ELAFIERFKA RASHAAQVQS RVKKLDKIEK
VEPPKVRRTV DFEFRPPPRS GEDVAKLAGV VKRYGERTVY GGLDFLVRRG ERWCVLGANG
AGKSTLLRMV AGESTPDAGS VTVGGSVKMG YFAQHAMELL RAEETVWDAL QRAFPRASVG
SLRTLAGCFG FSGDEIDKRC KVLSGGEKAR LVLATLLYDP PNFLVLDEPT NHLDAATREM
LVRALAGYEG TLLFVSHDRR FLASLSNRVL ELGPDGPVPY GGGYTEYVAR TGREAPGLRA
APGRAARA
|
|---|
| |