| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1775 |
|---|
| Symbol | |
|---|
| ID | 7298515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 1985045 |
|---|
| End bp | 1986472 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643594570 |
|---|
| Product | nitrite transporter |
|---|
| Protein accession | YP_002492183 |
|---|
| Protein GI | 220916879 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0610965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCG TCCCCGCCCC GGCGCCCGTT CCCGAGCCCG TCACGCCCCC GCGCCGCCGC
GCGCGCCTCA TCACGCAGTG GGACCCGGAG GACCGCGCCT TCTGGAGCGC CGCGGGCCGC
CGGGTGGCCC GCCGCAACCT CTGGCTGTCG ATCTTCGCCC TGTTCCTCGC GTTCGCGGTC
TGGATGGTGT GGAGCGTGGT GGCGGTGAAG CTGCCCGCCA TCGGCTTCCG CTTCACCACC
AACCAGCTCT TCTGGCTGGC CGCCCTCCCC GGCCTCTCCG GCGCGACGCT GCGCATCTTC
TACGCGTTCG CGGTCCCGGT CTTCGGCGGC CGCCGCTTCA CCGCGCTCTC CACCGCCTCG
CTGCTGCTGC CGGCGATCGG CATCGGCGTC GCGGTGCAGG ACCCGGACAC CTCCTACTCG
ACGTTCCTGG TGCTCGCGCT CCTCACCGGC CTCGGCGGCG CGAACTTCGC CTCGAGCATG
TCCAACATCA GCTTCTTCTT CCCGCGCGCG GAGAAGGGCA CCGCGCTCGG CCTGAACGCC
GGCCTCGGCA ACCTGGGCGT CTCCGGCGTG CAGCTCGCGG TCCCGCTGGT GGTGGCGGCC
GCGCTGCTCG GCCCGCTCGC GGGCGGGCCG CAGGCGCTGC CCGGCGGCAA GCAGGTCTGG
CTGCAGAACG CCGCGTTCGT GTGGGTGCCG CTCATCGTGG TCGCATCCGT GCTCGCCTGG
TTCGGCATGG ACGACCTCGC CAGCGCGAAG GCCTCCTTCC GCGAGCAGTC GGTGATCTTC
CGGCGCAAGC ACAACTGGCT CGTGTCGCTG CTGTACCTCG GCACGTTCGG CTCGTTCATC
GGCTACTCCG CCGGCCTCGC GCTGCTCACC CAGGCGTCCT TCCCGGCGGT GGACCCGACC
CGGTACGCGT TCGTGGGGCC GCTGGTGGGC GGCCTGGCGC GGCCGGTGGG CGGGTGGCTC
GCGGACCGGC TGGGCGGCGC CCGGGTGACG CTGGTCACGT TCCTGGTGAT GGGGCTCGCG
GCGGTGGGCG TGCTCCTGGC GCTGCCCCGC GGCGGCGGGC CCGGCAGCTT CGGCGGCTTC
CTCGCGGCGT TCGTGGTGCT CTTCACCGCG ACCGGGATCG GGAACGGCTC GGTGTACCGG
ATGATCCCGG TGATCTTCTC CACCTTCCAC CAGCGGCGCG CCGGCACCGA TCCGGTCGCG
CTGGCCCAGG CGCAGAAGGA CGCGCTCCGC GAGGGCGGCG CGGTGGTCGG CTTCGTCTCC
GCCATCGCCG CCTACGGCGC GTTCTTCGTG CCGCGCACCT TCGGCATGTC GGTGGAGCTG
ACCGGCGCGC CGCACGGCGC GGTGCTGGCG TTCGTGGCCT ACTACGCGGG CTGCATCGCG
CTGGTGTGGT GGTACTACGC CCGGCCGCGG GCCGAGATCC CGGCGTGA
|
|---|
| Protein sequence | MSPVPAPAPV PEPVTPPRRR ARLITQWDPE DRAFWSAAGR RVARRNLWLS IFALFLAFAV
WMVWSVVAVK LPAIGFRFTT NQLFWLAALP GLSGATLRIF YAFAVPVFGG RRFTALSTAS
LLLPAIGIGV AVQDPDTSYS TFLVLALLTG LGGANFASSM SNISFFFPRA EKGTALGLNA
GLGNLGVSGV QLAVPLVVAA ALLGPLAGGP QALPGGKQVW LQNAAFVWVP LIVVASVLAW
FGMDDLASAK ASFREQSVIF RRKHNWLVSL LYLGTFGSFI GYSAGLALLT QASFPAVDPT
RYAFVGPLVG GLARPVGGWL ADRLGGARVT LVTFLVMGLA AVGVLLALPR GGGPGSFGGF
LAAFVVLFTA TGIGNGSVYR MIPVIFSTFH QRRAGTDPVA LAQAQKDALR EGGAVVGFVS
AIAAYGAFFV PRTFGMSVEL TGAPHGAVLA FVAYYAGCIA LVWWYYARPR AEIPA
|
|---|
| |