| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1754 |
|---|
| Symbol | |
|---|
| ID | 7298494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 1959910 |
|---|
| End bp | 1962156 |
|---|
| Gene Length | 2247 bp |
|---|
| Protein Length | 748 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643594549 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_002492162 |
|---|
| Protein GI | 220916858 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.133127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAGC TCCTCGCCCT GCTGTCCTCC CTCAAGCTCG CCGTGATCCT GCTCGTGCTG
CTGCTGCTCG GGCTGTCGGC GGGCACGATC ATCGAGTCGC GGTCCGGCGT CGAGGTGGCG
GGTCGGCTCG TCTACTACGC GCCCTGGTTC CTGGCGCTCC AGGCGCTGTT CACGGTGAAC
GTGGTCGCGT CGCTGGTCGC GCTGTTCCCG TACGGGAAGA TGCGGATCGG CTACCTGCTC
ACCCATGGCT CGCTGGTGCT GATCCTGGTC GGCGCGCTCG TCACCTACTT CTTCAAGGTG
GAGGGGACGC TCGGCCTGTG GGAGGGCCAG ACCGGCAACG AGATCGACCA GGTGGAGAAC
GGCCAGCTGG TGGCGCGACA CACGCTGCCG TTCTCGGTCC GGCTGATGGA CTTCCAGATC
GACCACTACC CGGGGACGAT GCGCCCGGCG CAGTTCCGCA GCTACGTGGT CATCCTCGAT
GCGCAGACCG GGGCCGGCAC GCCCGGCGCG CTCTGGATGA ACCACCCGCT GGAGGTGGCG
GGGTACACCA TCTTCCAGTC GAGCTACCAG CAGGAGAACG GGCGCGAGGC GTCGGTCTTC
TCGGTGTCGA AGGACCCGGG CCAGCCCATC GTCTTCGCCG GCTACGTGCT GCTGGTGCTG
GGCATGTGCG TGGTGTTCGG CACGCGCATC GTGCAGCGCC GCCGCGCCGC CGCGCTGCTC
GCGAGCCTGG CCGTGCTCGC GCTGGCGCGC CCCGCCGCCG CCGAGGATCA GGTGACGAAG
GCCGATCTGG AGGCGCTGCG GCGCCTGCCG GTGCAGGCCG ACGGGCGCCT CATGCCGCTC
GACACGTGGG CGCGCGAGAA CGTCTGGAAG ATCACCGGCC GGCGGCAGTG GCAGGGCCGC
GACTCGGTGG TGGTCGCGGC GGGCTGGCTG GCGAACCCGC AGGCCGCCGC GAACGAGCCG
GTGATCGCGC TCGACGACGC GAAGCTCGCC GAGGCGATCG GGCTCCCCGG CGCCACGCAC
GCGGCGCTGG TGCAGGTGGC GCGCAGCCCG CAGTTCGGGC AGCTCATGCG GCAGGCCTCC
GAGCAGGAGG CGCACAACGA GCCGCGCCGC GGCGTCCTCG CCGACGTCGA GAAGCTCTAC
GAGCGCGCCC AGCGCATGGG CGACCTCATC TCCGGCGGCG TGCGACCGGT GCCGGTGGGC
GGGCCCGCCG AGGCGCGCTG GAACCCGGCG CCGCAGCCGG GGCTTCCGGG CCTGCTCGAG
GTGGCCCGCG GGCCGCGCCT GGAGGGCTGG CCGTCGGCCG CCGCAATGGA TCGCGAGGTC
TCGTACAACG CCACGCGCCC GAGCCGCATC GCCTGGATCG TGCTGGTGGG TGCGCTGGTG
GCCGCGATCG CCGGCTGGCG CACGCGGAAC CGCACGCTCG ACGCGGCCGC GGCGGTGCTG
CTGGTGATCG GGTTCGGGGT GATGACCTGG GGCCTCGGCA CCCGGTGGGC CGTCGGTGGC
CGCGTGCCCG CGTCCAACAT GTACGAGTCG ATGCTGTTCC TGGCGTGGGG CGTGGGCCTG
TTCGCGCTCG TCGCGCTCGT GTTCATCCGC AACCGGCTGG TGCTGGTGAA CGCGAGCGCC
GGCGCCACGC TCACCATGCT GCTGGTGGAC CTGCTGCCCA TGGACGGCTT CATCCACCCG
ATGCCGCCGG TGCTCACCGG CACGCCCTGG CTCGCCATCC ACGTGCCCAT CATCATGGTG
AGCTACGCGG TGCTGGCGCT GGGGGTGATC ATCGCGCACA TGCAGATCGC GTTCGGCGCG
CTGGCGCCCA GGCGCGAGGA CCTCATCGAG AAGATGGCCG ACCTGAACTA CTGGTACACG
ATGGTCGGGT CGATCCTGCT CATCGCCGGC ATCCTCACCG GCTCGATCTG GGCGGCGTCG
TCGTGGGGCC GGTACTGGGG CTGGGATCCG AAGGAGGTCT GGTCGCTGGT CGCCTTCCTC
GCCTACATGG CCATCCTGCA CGGCCGCTCC GACCGGCTCC TCGGCCGGTT CGGCGTGGCG
GCCTGGAGCA TCATCGCGTT CCAGACCATC CTCATGACGT ACCTCGGCGT GAACTACGTC
CTCGGGACCG GGCTCCACGC GTACGGCTTC GGCGACTCGC CCATCGTGAT CTGGATGGTG
CTCATCGCGC TGGCCGAGAT CGCGTTCCTG GCCTGGGGCG GGTTCGCCCA GCGCCGCGGC
CAGGCGCGCA CGCCGGCGGC CGGGTAG
|
|---|
| Protein sequence | MPKLLALLSS LKLAVILLVL LLLGLSAGTI IESRSGVEVA GRLVYYAPWF LALQALFTVN
VVASLVALFP YGKMRIGYLL THGSLVLILV GALVTYFFKV EGTLGLWEGQ TGNEIDQVEN
GQLVARHTLP FSVRLMDFQI DHYPGTMRPA QFRSYVVILD AQTGAGTPGA LWMNHPLEVA
GYTIFQSSYQ QENGREASVF SVSKDPGQPI VFAGYVLLVL GMCVVFGTRI VQRRRAAALL
ASLAVLALAR PAAAEDQVTK ADLEALRRLP VQADGRLMPL DTWARENVWK ITGRRQWQGR
DSVVVAAGWL ANPQAAANEP VIALDDAKLA EAIGLPGATH AALVQVARSP QFGQLMRQAS
EQEAHNEPRR GVLADVEKLY ERAQRMGDLI SGGVRPVPVG GPAEARWNPA PQPGLPGLLE
VARGPRLEGW PSAAAMDREV SYNATRPSRI AWIVLVGALV AAIAGWRTRN RTLDAAAAVL
LVIGFGVMTW GLGTRWAVGG RVPASNMYES MLFLAWGVGL FALVALVFIR NRLVLVNASA
GATLTMLLVD LLPMDGFIHP MPPVLTGTPW LAIHVPIIMV SYAVLALGVI IAHMQIAFGA
LAPRREDLIE KMADLNYWYT MVGSILLIAG ILTGSIWAAS SWGRYWGWDP KEVWSLVAFL
AYMAILHGRS DRLLGRFGVA AWSIIAFQTI LMTYLGVNYV LGTGLHAYGF GDSPIVIWMV
LIALAEIAFL AWGGFAQRRG QARTPAAG
|
|---|
| |