| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1733 |
|---|
| Symbol | |
|---|
| ID | 7298704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 1934890 |
|---|
| End bp | 1935795 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 643594528 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002492141 |
|---|
| Protein GI | 220916837 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.368943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGA ACCGGATCGC GGTGTTCGCG CAGGTGGTGG AGGCGGGCAG CTTCACCGCC
GCGGCGGCGT CGCTGGGCCT GCGCAAGTCG TCGGTGAGCC GCGCGGTGGC GGCGCTCGAG
GCCGACCTGG GCATCCGCCT GCTGCAGCGG ACCACCCGCC GGCTCAGCCT CACCGACGCG
GGCCGCGCCT ACTACGAGCG GACCCGCGAC GCGCTGGCCG GGCTGCGCGA GGCGAGCGAG
GAGGCGGCGG CGCTCGGCGC GGAGCCGCGG GGGACGGTGC GGGTGACCGC GCCGGTGGAC
CTGGCGCCCG ACCTGGCGCG GCTGACGGAC GCGTTCCTGC GCGCGCACCC GCAGGTGCGC
GTGGAGGTGT CGCTCACGGC GCGGTACGTG GACCTCGTGA AGGAGGGCTT CGACCTGGCC
ATCCGCGCCG GCGTCCTCGC CGACTCCTCG CTGCTCGCGC GGAAGCTCTC GGACAGCGCC
CTCGCGCTGT TCGCCGCGCC GTCCTACCTG CAGGCGCGCG GGCGGCCGCG GCGCCTCGCC
GACCTGGCCG GGCACGACTG CCTGCTCTAC CGCGCCGGCC CCGAGACCGC CGTGTGGCGG
CTCACCGGCC GTCGCGGCGA GGAGCAGGTG ACGGTGCACG GGCGCGCCGC CGCCGACGAG
TTCGCCTTCG TGCGCGGCAT GCTGGTCGCG GGCGCGGGGA TCGCCCTGGT GCCCACCGGC
ATGGTGGCCG CCCCCCTGCG CGAGGGCGCG ATCGAGCGGG TGTTGCCGCA GTACGTCCGG
CGCGGCGGCC CGGTGAGCGT GGTCTGGCCG AGCCGGCGGT ACGAGCCGGT GGCGGTGGCG
CGCTTCCGCG ACGCGATCGT GGCCGCGCTG GGCGAGCCCG GCGCCGGGGC GGAGGCGCGC
GGCTGA
|
|---|
| Protein sequence | MDLNRIAVFA QVVEAGSFTA AAASLGLRKS SVSRAVAALE ADLGIRLLQR TTRRLSLTDA
GRAYYERTRD ALAGLREASE EAAALGAEPR GTVRVTAPVD LAPDLARLTD AFLRAHPQVR
VEVSLTARYV DLVKEGFDLA IRAGVLADSS LLARKLSDSA LALFAAPSYL QARGRPRRLA
DLAGHDCLLY RAGPETAVWR LTGRRGEEQV TVHGRAAADE FAFVRGMLVA GAGIALVPTG
MVAAPLREGA IERVLPQYVR RGGPVSVVWP SRRYEPVAVA RFRDAIVAAL GEPGAGAEAR
G
|
|---|
| |