Gene A2cp1_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_1580 
Symbol 
ID7296338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp1767473 
End bp1768288 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content76% 
IMG OID643594376 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_002491990 
Protein GI220916686 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATCG ACTCCACGCT CATCGCCGCC ATGGACTGCC GCGAGCTCGA GCGATCGATC 
GACGCGTACC TGGACGGCGA GTTCGACGAG CGCGAGCGCG CCGAGGCGGA GGCCCACCTC
GCCGCCTGCA CGCCGTGCCG CGCCATGGCC GACCGCCAGG GCGCGCTCCG GCTCGCGCTC
CGCGCCAAGC TCCGCGAGGC GATGGCCTCG CCCGCCGCCG CCGGCTGCGC GCCCCCGGCC
CTTCGCGCGC GCGTCCGCAC CTCGCTCGCG CACGAGCGCC GGCCGCTCTG GCGCCGGGTG
CTCCAGCCGG TCCCCGCGGC CGCCGTGGCC GCCTGCGCCA TGGGCGCGCT GGTGGTGCTG
GCGGGTCACC GGGGCGACAC CGCGCTGGTG GACGACGCGA TCCGGGTGCA CCACCGCGCG
CTGCCGCTCG AGGTGGACGC CGCGGCCATG CCGGGCTGGT TCGCGGGCAA GCTCGACTTC
CACCCCGCCC TGCCGCACTT CGACGGCGGC GGCGCGCGCG TCGAGGGTGC GCGGCTCTCC
AACCTGCGCG AGTGGCCGGC CGCCTACGTG CGCTACCAGC TCCCGCGCGG GCAGGCCGGG
CTGTTCATCG TGGACGACCC CGACCGCCGC TTCGACACGC CCGGCCGCGA GGTGAAGGTC
GGTCCGCAGG TCGTCCGGGT GGTCAACGCG CGCGGGTACA ACGTGGCGGT GTGGCGCCAG
GACGAGATCG TCTACTCGCT GGTCTCGGAC CTCGACGAGG ACGCGCTGTT CAGGCTCGTC
CAGGCCGCCC AGGCGGAAGC CGCCGGCGGC CGATAG
 
Protein sequence
MRIDSTLIAA MDCRELERSI DAYLDGEFDE RERAEAEAHL AACTPCRAMA DRQGALRLAL 
RAKLREAMAS PAAAGCAPPA LRARVRTSLA HERRPLWRRV LQPVPAAAVA ACAMGALVVL
AGHRGDTALV DDAIRVHHRA LPLEVDAAAM PGWFAGKLDF HPALPHFDGG GARVEGARLS
NLREWPAAYV RYQLPRGQAG LFIVDDPDRR FDTPGREVKV GPQVVRVVNA RGYNVAVWRQ
DEIVYSLVSD LDEDALFRLV QAAQAEAAGG R