| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1552 |
|---|
| Symbol | |
|---|
| ID | 7296310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 1733828 |
|---|
| End bp | 1735768 |
|---|
| Gene Length | 1941 bp |
|---|
| Protein Length | 646 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643594348 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_002491962 |
|---|
| Protein GI | 220916658 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG CGGTGCGGCT CCCGGGCTTC GAGGACTGGC GGGCCCAGGT GAAGTGCCAG
GTCGGCTGCC CCGTCGACAC CGACGGCGGC CGCTACTGCC AGCTCGTCGC GCAGGAGCGG
TACGAGGAGG GGTACCTCGT CGCCCGGGCC CCGAATCCGT TCGCGTCGGT GTGCGGCCGC
GTCTGCGCGG CGCCGTGCGA GGACGCCTGC CGCCGCGGCA CCATCGACGC GCCCATCACC
ATCCGCGCCC TGAAGCGGAC CCTCACCGAG CGCTACGGCG TCGAGTCGGT CCACCCCGAC
GCGCAGGACC GCCTCCGCGA GGCGCTGGTG CCGGAGGGCA ACCGCTACCC GGGGCACCTC
CCCACCGCGC CGCTCCGCCG TCCGGCGCAG GCCGGCGGCC GCAAGGTCGC GGTGATCGGG
GCCGGGCCGG CCGGGCTCTC GGCCGCGCAC GATCTCGCGC TGCTCGGCCA CGACGTGACG
GTCCTCGAGG CCGCCGAGGA GCCGGGCGGG ATGATGCGCT TCGGCATCCC CGAGTACCGG
CTGCCCCGCA GCGTGATCCG CGGGGAGATC GAGAAGATCC TGGCGCTCGG CGTCACGCTC
CGGACCAGCG CGCCGCTCAC CGCCGAGCGC GGCCTCGCCG CGCTGAGGGC CGAGGGCTTC
GAGGCGTTCT TCCTCTCGGT GGGCGTGCAG AAGGGGCGCG ACCTCGCCAT CCCCGGCGTC
GAGCTCGACG GCGTGGTCAA GGCGGCCGAC TTCCTGCTCA ACGCAAACCG CGGCTACCGG
ATGGACCTGG GCCAGCGCGT GGTGGTGATC GGCGGCGGGT TCGTGGCGTT CGACGCCGCG
CGCATGGCCC TGCGCGCCGG GCGGGAGGAC CGCGAGGACG ACGTCCGCGC CCTGGGCGCG
AGCCTGAAGG CGGAGTCGGA CGCGCGCCTG GTCGAGGCGC TCGACTCGGC GCGCGCGGCG
GTGCGCGGCG GCGCCGCCGA GGTGACCATC GTCTCGCTGG AGAGCTTCAC CGAGATGCCG
GTCCTGCGGA CCGCGCAGGG GCACGAGGAG TTCCAGGAGG CGAAGAAGGA GGGGATCCGC
TTCGAGCCGC GGCGCGGGCC GAAGCGGTTC GTGGGGTCCG GCCGGCTCGA GGCGGTCGAG
CTGCGCGCGG TGACGCGGGT CTTCGACGAC GCGGGCCGCT TCTCGCCCGC CTACGACGAC
CAGGACGTCG TCGCCGTCCC CGCGGACGGC TGCATCCTCG CCATCGGCCA GCGCGCCGAC
CTCTCCTTCC TCCGCCCCGA GGACGGGGTG GAGCTCACGC CGGCGGGGAC GATCAAGGTG
GACCGGACCA CGCTCGCGAC CAGCGCGCCG GGCGTCTACG CCGGCGGCGA CGTGGCGTTC
GGTCCCCGGA ACCTCATCGA GGCGATCGCG AACGGGAAGC GGGCCGCGCG CTCCATCCAC
GAGCACCTGT CGGGCGAGGC CGCCCGGCTC GAGGCGATCA TCTCCGTCCA GAAGATCCCC
ACCCGCGACT ACCGGATGAT CGCCGGCTTC GAGCTGCTCG ACCGCGAGGC GCCCCCCACG
CTCGACCTGG GGCGGCGGAG CGGCATCGCC GAGGTGGAGA GCGCGTTCGC GGCCGACGAG
GCCATCGCGC AGGGCGCGCG CTGCCTCGTC TGCCACGTCC AGACCATCTA CGATCCGGAG
AAGTGCGTGC TCTGCGGGCG CTGCGTGGAC GTGTGCCCGG AGTACTGCCT GGCGCTGGTG
CCGCTCGAGG ACGTGGACCT GCCGGAGGAG GAGCGGCGGG CGCTCGCCGC GGCGGCCGAG
GCCGGCGGCC TGCCGCTCTC CGCCATGATC AAGGACGACG CGCCCTGCAT CCGGTGCGGG
CTCTGCGCCA TCCGCTGTCC GACCGACGCG ATGACGATGG AACGGTTCCA GCTCACGCAG
CGCTACGCCC CCGCGGCCTA G
|
|---|
| Protein sequence | MRIAVRLPGF EDWRAQVKCQ VGCPVDTDGG RYCQLVAQER YEEGYLVARA PNPFASVCGR
VCAAPCEDAC RRGTIDAPIT IRALKRTLTE RYGVESVHPD AQDRLREALV PEGNRYPGHL
PTAPLRRPAQ AGGRKVAVIG AGPAGLSAAH DLALLGHDVT VLEAAEEPGG MMRFGIPEYR
LPRSVIRGEI EKILALGVTL RTSAPLTAER GLAALRAEGF EAFFLSVGVQ KGRDLAIPGV
ELDGVVKAAD FLLNANRGYR MDLGQRVVVI GGGFVAFDAA RMALRAGRED REDDVRALGA
SLKAESDARL VEALDSARAA VRGGAAEVTI VSLESFTEMP VLRTAQGHEE FQEAKKEGIR
FEPRRGPKRF VGSGRLEAVE LRAVTRVFDD AGRFSPAYDD QDVVAVPADG CILAIGQRAD
LSFLRPEDGV ELTPAGTIKV DRTTLATSAP GVYAGGDVAF GPRNLIEAIA NGKRAARSIH
EHLSGEAARL EAIISVQKIP TRDYRMIAGF ELLDREAPPT LDLGRRSGIA EVESAFAADE
AIAQGARCLV CHVQTIYDPE KCVLCGRCVD VCPEYCLALV PLEDVDLPEE ERRALAAAAE
AGGLPLSAMI KDDAPCIRCG LCAIRCPTDA MTMERFQLTQ RYAPAA
|
|---|
| |