Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_1541 |
Symbol | |
ID | 7296299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 1721520 |
End bp | 1722362 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 81% |
IMG OID | 643594337 |
Product | polysaccharide deacetylase |
Protein accession | YP_002491951 |
Protein GI | 220916647 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0577624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGGCCC GCAAGCGGCT CGCGGTGGCG CTGGCGGTGC TCGGGGGCGT GGCGCTGCTC GCGCTGGCGG CGTGGCTGGC GATCCGGGGA CGCCCGGGAC CCGGCGCGGC GCTCGGGCTC GCCACGGTCG CCGCCGCGCT CGGCGTCCTC CAGGCGCTCT GGGTGCCGTT CGATCTCACC GGCCGGAGCC TGCGGCGCGG GCCGCCGGGG TCGCGGGCGG TGGCGCTCAC CTTCGACGAC GGGCCCTCCG ACGACACGCC GGCGGTGCTG GCCGCGCTCG ACCGCGCCGG CGTCCGGGCC ACGTTCTTCG TGCTGGGCGA GGCGGCGCGC CGCGCGCCGG AGCGGGTCCG GGAGGTCGCC CGCCGCGGGC ACCTGGTGGC GCTGCACGGC GACACGCACG CGAAGCTGCT CCTGGCGGGG CCGCGGCGGG TGGCCGCCGA GCTCGATCGC TGCGCCGACG CCATCCGCGC CGCCGGCGTC GAGCCCGCGC CGCTGTTCCG CGCGCCGCAC GGCTTCCGCG GCCCGTTCCT CGGGCCGGCG CTGCGCCGGC GCGGCCTCAC GCTGGTGGGC TGGACGCGCG GCGTCTTCGA CACCGAGCGC CCGGGCGCCG AGGCCATCGC GGCGAGCGCC AGCCGCCGCA TGCGGCCCGG CGAGATCCTG CTGCTGCACG ACGGCTGCGC CACGCCCGGG ATCGACCCGC GCCGCGACCA GACCGCCGCT GCGGTGCCGG AGATCGTCCG CCGCTGGCGC GAGGCCGGGT ACGCGTTCGT GACGCTGGAC GCGTTCGCCG CGCCGCGGGG GGCGGAGGGC GGGGCGGGCG CCGCCGCGCG GGGAGGGGCG TAG
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Protein sequence | MPARKRLAVA LAVLGGVALL ALAAWLAIRG RPGPGAALGL ATVAAALGVL QALWVPFDLT GRSLRRGPPG SRAVALTFDD GPSDDTPAVL AALDRAGVRA TFFVLGEAAR RAPERVREVA RRGHLVALHG DTHAKLLLAG PRRVAAELDR CADAIRAAGV EPAPLFRAPH GFRGPFLGPA LRRRGLTLVG WTRGVFDTER PGAEAIAASA SRRMRPGEIL LLHDGCATPG IDPRRDQTAA AVPEIVRRWR EAGYAFVTLD AFAAPRGAEG GAGAAARGGA
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