| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1534 |
|---|
| Symbol | |
|---|
| ID | 7296292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 1713330 |
|---|
| End bp | 1714481 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643594330 |
|---|
| Product | Extracellular ligand-binding receptor |
|---|
| Protein accession | YP_002491944 |
|---|
| Protein GI | 220916640 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.688038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGA AGCTCGCGAT GGCCGTGGCG GCGCTCGCCC TCGCGCTGCC CGGCACCGGC
AGCGCGCAGG TGAAGATCGG CTTCATCAAC TCCATCACCG GCCCCGAGGC GCCCATCGGC
GAGAACCTCA CCAACGGCGT GGACATGGCC GTCGAGGATC TCAAGAAGCA GGGCGTGAGC
GTCACGATCG TGAAGCAGGA CGACACCGGC AAGCCGCAGG TGGCCATGAG CGCCATGGAG
CAGCTCGCCA CCGGCGACGA GGTCGCCGCC GTGGTCGGCC CGTACACCTC CGCCACCGCG
AACGCCGTCG CGAAGCTGGC CCAGCAGTAC AAGGTCCCGC AGGTCGTTCC GGCCGCCGCG
AAGGAGGAGA TCACCAAGCA GGGCTACGAC TGGGTGTTCC GCCTGAACGC CCCGGCGCAC
CAGTACGCGC AGTCGCTCAT CGACGCGGCG CTGACGTTCG GCAAGCCGAA GTCGATCGCG
TTCATCTACG AGTCCACCGA CTTCGGCGCG TCGGTCGCCA CCGCCGGCAA GGACTACGCG
CAGAAGAAGG GCCTGAAGAT CGTGGCGGAC GAGGCCTACC AGAAGGGCGC GCCCGACTAC
CGCTCCACGC TCACCAAGAT CAAGGCGCAG AACCCCGACC TCGTCTTCAT GGTCTCGTAC
GTCGCCGACG CCATCCTGCT GATGCGGCAG TCGCGCGAGG TGGGCCTGAA GCCGCAGGCG
TTCCTGGGCG GCGGCGCCGG CTTCGACACC GCGCAGTTCG AGAGCGAGAA GGACATCTCC
AACCTGGTCT ACTCGGTCAC CCAGTGGACG CCCGAGTCGT CCAAGGCGGC CACCGCGTTC
GCCGATCGCT ACAAGGCGAA GTACGGCAAG AAGCCCACGT ACCACGCGGC CTGCGCCTAC
GCGGCGATGA TGATCGTGGG CGAGACCGCC GCGAAGAACG GCGGCGACCG GAAGAAGATC
CGAGACGCGC TCGCGAACGG CTCGTGGACC GGGATCATGG GCAAGGTGGA CTTCGAGACG
TACGAGGGCT TCACCAACCA GAACAAGCTC GTCATGCCGG TGATCCAGTA CCAGGGCGGC
AAGTCGGAGA CCGTCTTCCC TAAGGAAGCG GCGCAGAAGA AGGCCGTCTA CCCGTTCCCC
GGCTGGAAGT AG
|
|---|
| Protein sequence | MTKKLAMAVA ALALALPGTG SAQVKIGFIN SITGPEAPIG ENLTNGVDMA VEDLKKQGVS
VTIVKQDDTG KPQVAMSAME QLATGDEVAA VVGPYTSATA NAVAKLAQQY KVPQVVPAAA
KEEITKQGYD WVFRLNAPAH QYAQSLIDAA LTFGKPKSIA FIYESTDFGA SVATAGKDYA
QKKGLKIVAD EAYQKGAPDY RSTLTKIKAQ NPDLVFMVSY VADAILLMRQ SREVGLKPQA
FLGGGAGFDT AQFESEKDIS NLVYSVTQWT PESSKAATAF ADRYKAKYGK KPTYHAACAY
AAMMIVGETA AKNGGDRKKI RDALANGSWT GIMGKVDFET YEGFTNQNKL VMPVIQYQGG
KSETVFPKEA AQKKAVYPFP GWK
|
|---|
| |