| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1530 |
|---|
| Symbol | |
|---|
| ID | 7296288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 1709705 |
|---|
| End bp | 1710409 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643594326 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002491940 |
|---|
| Protein GI | 220916636 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.290115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGC TCGAGAAGCT GTCCTTCGCC TACGGCGACC TGAAGGTCCT CTGGGACGTG
GACCTGGAGG TGAAGCAGGG CGAGATCGTG ACGGTGGTCG GCGCGAACGG CGCCGGGAAG
TCCACCATCC TGAAGAACGT CTCGCGCCTG GTGAAGCCGG GCCACGGCCA CATCACGTTC
CAGGGCCACG ACCTGCGCAA GCTGGCGTCG CACGAGGTGG TGGAGCTGGG CATCGTGCAG
GTGCCGGAGG GCCGCCGCAT CTTCCCGGAG ATGACGGTGG TCGAGAACCT GCGGATGGGC
TCGTTCGTGA AGTCCACGCG CAAGGACCGC GAGCGCAACA TCGAGCGCGC CTTCACCCTG
TTCCCCCGCC TGAAGGAGCG CGCGAAGCAG CTCGGCGGCA CCATGTCCGG CGGCGAGCAG
CAGATGCTGG CCATCGCGCG GGGCCTGATG GCGAACCCGA AGCTGCTGCT GCTCGACGAG
CCCTCGCTGG GGCTCTCTCC GCTGCTGGTG AAGAGCATCT TCGAGATCAT CAAGGAGATC
AACCGCCAGG GGACCACCAT CCTGCTGGTG GAGCAGAACG TCTACCAGTC GCTCCGCATC
TCCACGCGCG CGTACGTGCT GGAGACGGGA CGGGTGGTAC TCTCGGGCAC GGGCGCGGAG
CTGCTCGACA ACGCCCACGT CAAGAAGGCC TTCCTGGGGA TGTGA
|
|---|
| Protein sequence | MLKLEKLSFA YGDLKVLWDV DLEVKQGEIV TVVGANGAGK STILKNVSRL VKPGHGHITF
QGHDLRKLAS HEVVELGIVQ VPEGRRIFPE MTVVENLRMG SFVKSTRKDR ERNIERAFTL
FPRLKERAKQ LGGTMSGGEQ QMLAIARGLM ANPKLLLLDE PSLGLSPLLV KSIFEIIKEI
NRQGTTILLV EQNVYQSLRI STRAYVLETG RVVLSGTGAE LLDNAHVKKA FLGM
|
|---|
| |