Gene A2cp1_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_1208 
Symbol 
ID7299074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand+ 
Start bp1357634 
End bp1358311 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content73% 
IMG OID643593995 
ProductABC transporter related 
Protein accessionYP_002491618 
Protein GI220916314 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCCG CGCCGCTCAT CCGCATCGAG GGTCTGGGGA AGACCTACCT CATGGGCGAG 
AAGCGCCTGG AGGTGCTCCG CGGGATCGAC CTGGAGATCG CCGCCGGCGA GCTGGTGGCG 
CTCACCGGCC CGTCCGGCGC CGGCAAGAGC ACCTTCCTGC ACCTGCTGGG CGCGCTCGAC 
GTGCCCACCC GCGGGCGGGT CCTGTTCGAG GGGGAGGACG TGTTCGGGCG CGGCGAGGAC 
GGCCTGGCCG CGTTCCGGAA CCAGACCATC GGGTTCGTGT TCCAGAGCCA CCACCTGCTG 
CCCGAGTTCA CCGCGCTGGA GAACGCCATG ATGCCGGCGC TCATCCGCCG CGTGGCCCGC 
GGCGACGCCC GCCGCCGCGC CGCCGAGATG CTGGAGACGG TCGGCCTGGG CGAGCGGATG 
GAGCACCGGC CCGGCGAGCT GTCCGGCGGG GAGCAGCAGC GCGTCGCGCT GGCCCGCGCG 
CTGTGCCTCC AGCCGAAGCT GCTGCTCGCG GACGAGCCGA CCGGCAACCT CGACCCCCAG 
ACCGCCGAGG GAATCCACGC CTTGCTCGCA GACCTGAACG TCCGGATGGG AATCACCGCG 
GTGGTGGTGA CGCACAACGA GCGGCTCGCC GCGGCGCTGC CGCGCCGGCT CCGCCTGGTC 
CAGGGACGGC TCGCTTGA
 
Protein sequence
MQPAPLIRIE GLGKTYLMGE KRLEVLRGID LEIAAGELVA LTGPSGAGKS TFLHLLGALD 
VPTRGRVLFE GEDVFGRGED GLAAFRNQTI GFVFQSHHLL PEFTALENAM MPALIRRVAR 
GDARRRAAEM LETVGLGERM EHRPGELSGG EQQRVALARA LCLQPKLLLA DEPTGNLDPQ 
TAEGIHALLA DLNVRMGITA VVVTHNERLA AALPRRLRLV QGRLA