| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1196 |
|---|
| Symbol | |
|---|
| ID | 7299062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 1340969 |
|---|
| End bp | 1341793 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643593984 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_002491607 |
|---|
| Protein GI | 220916303 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCCG CCTCAAGCCC TCGCGCGCGC CTGGCCGCGC TCGCCGTCGC CGCGCTCGCC
GCCGCGCCCC TCGCCGCCTC CGCCCAGCCG AAGGCCGCGC GCGGCAGGAC CGAGGTCACC
TGGTACGGCC ACGCCGCCTT CGTGGTGACC ACGCCCGGCG GCACCGTGCT CGCCATCGAC
CCGTGGCTCT CGAACCCGAA GGCGCCAGAG CCCGGCCTCG CCGGGAAGCT GCCGAAGGTG
GACTACATCC TCGTCAGCCA CGGCCACTTC GACCACGTGG GCGACGCCGT CGCGCTCGCG
AAGCGCACCG GGGCGAAGCT CATCACGAAC TTCGACCTCG GGAGCTCGCT GGTCGCGGCC
GGCTACCCGA AGGACCAGGC CGGGATGGAC ACGCTCGGCA ACATCGGCGG GACGATCCAG
GCCGGCGACG CCGCCGTCAC CATGGTCACC GCGGTCCACA GCTCCGGGTA CGCGGACGAC
AAGGGCACCG CGCACCCGGG CGGCAACCCC ATGGGCTTCG TGATCCAGGT GAAGGGCGGC
CCGACGCTCT ACCACACCGG CGACACCGAC CTGACGCAGG ACATGAAGCA GCTCCCGGAG
CGCTTCGGGC GCGTCGACGT GATGCTGACC TGCATCGGCG GCCACTTCAC CATGGACCCG
AAGGCCGCCG CCATCGCCGT GGGCTACGTG CGCCCGCGCA CGGTGGTGCC CATGCACTTC
GGCACGTTCC CGGCGATCGC GGGCACGCCG GAGGAGCTGC GGGCGGCGCT GAAGGGCAAG
GCCGAGGTGC GGGTGCTCGA GCCGGGCAAG CCGGTGGGGT TCTAG
|
|---|
| Protein sequence | MPSASSPRAR LAALAVAALA AAPLAASAQP KAARGRTEVT WYGHAAFVVT TPGGTVLAID
PWLSNPKAPE PGLAGKLPKV DYILVSHGHF DHVGDAVALA KRTGAKLITN FDLGSSLVAA
GYPKDQAGMD TLGNIGGTIQ AGDAAVTMVT AVHSSGYADD KGTAHPGGNP MGFVIQVKGG
PTLYHTGDTD LTQDMKQLPE RFGRVDVMLT CIGGHFTMDP KAAAIAVGYV RPRTVVPMHF
GTFPAIAGTP EELRAALKGK AEVRVLEPGK PVGF
|
|---|
| |