Gene A2cp1_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_1143 
Symbol 
ID7296540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp1275050 
End bp1275823 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID643593930 
ProductP-type conjugative transfer protein VirB9 
Protein accessionYP_002491554 
Protein GI220916250 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGCG TGATCGTTCT CCTTCTCGCC ATCGCCGTGT CCGCCGGAGC CTCCGAAGGC 
GGGCCGGACC GCCGGATTCG GTACGTGAGC TACGACCCGG ACACCGTCGT CCCCGTGGAC
GCGGTGGTCG GCATCGTCAC GCACATCGTC CTCGAGCCCG GCGAGAGCTA CGTGACGCAC
GCGTTCGGCG ACGGAAAGGC ATGGGACTTC GCCGCAAAGG CAAACCACTT CTTCCTCAAG
GCGGTCGCGA TGAACGCCGA CTCGAACCTG ACCATCGTCA CCGACCGGCG GAGCTACCAC
TTCAGTCTCC GGCTCCTCGC GGAACCGAAG GCGGCGCCGA CCTTCGAGAT CGCCTTCCGC
TACCCCGATA CCGAAGCGCG GAAACGCCGC GAGGTTGCGC GGCGGGCCGC GGTCGATGAC
GGGTTCAAGG GCAACGGCGA GCTGCCGAAT CTGGACTACA CGATGAGCGG CGATCTCGAC
CTCTCGCCAG TGAACACGTG GGACGACCGC GAATTCACGT ACTTCAAGTT TCCCGGCCAG
CGCGACATCC CGTCCATCTA CACGGTGGAC CTGGACGGCA ACGAGTCGAT CGTGAACCGC
CACAGCACGG GACCGTCGAA CGAGATCGTG GTCGTCCACA AGGTCGCCGC CCGCTGGGTG
CTCCGGCTCG GCTCGCGCGC GCTCGCCATA TGGAACGACG CGTACGACCC CGGGGGACGA
CGGAACGTGA GCCGGACGGC CTCGCCGGAC GTGAACCGCG TGCTCTGGAG GTAG
 
Protein sequence
MRRVIVLLLA IAVSAGASEG GPDRRIRYVS YDPDTVVPVD AVVGIVTHIV LEPGESYVTH 
AFGDGKAWDF AAKANHFFLK AVAMNADSNL TIVTDRRSYH FSLRLLAEPK AAPTFEIAFR
YPDTEARKRR EVARRAAVDD GFKGNGELPN LDYTMSGDLD LSPVNTWDDR EFTYFKFPGQ
RDIPSIYTVD LDGNESIVNR HSTGPSNEIV VVHKVAARWV LRLGSRALAI WNDAYDPGGR
RNVSRTASPD VNRVLWR