Gene A2cp1_1142 details

Gene Information

• Locus tag: A2cp1_1142
• ID: 7296539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: +
• Start bp: 1274360
• End bp: 1275037
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643593929
• Product: VirB8 family protein
• Protein accession: YP_002491553
• Protein GI: 220916249
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3736] Type IV secretory pathway, component VirB8

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGGCGG GGGACCTGGA GCAGTACCTC GAGGAGAGCA GGGGGCTTGA GCGCGACTAC 
CTCGAGGAGC TCGTGCGCTC GAGGAGGGTG GCGTGGCGGG TGGCGGCGAG CGCGGCCGTG 
CTAGTAGCGG CCGCGCTCGC CACGGTGGTG GCGCTGGTCC CGCTGAAGCG CGTCGAGGCG 
TTCGTGCTGC GGGTCGACAA CGCCACGGGA GCGGTGGATC TGGTGACGAC GCTCCGCGAC 
GGGCAGGCGG GCTACGGCGA GGTGGTCGAC CGGTATTTCC TCAACAAGTA CGTCCTCGCC 
CGGGAGAGCT ACGATTACGA GACGCTCCAG ACCGCGTACG ACACGACCGC GCTCATGAGC 
AGCGGCGAGG TCCAGCGCGA GTACGCGGGG CTTTTCGACG GGCCGAAGGC GCGGGACAAG 
GTCCTCGCGA ACCGCGTCCG GATCGTCGTG AAGGTCCGTT CAATCGCGCC TGGCACGACC 
CGCAACACCG CGGTCGTGCG ATTCGCGACG CGCGCGGCGC ACGCCGATGG GACGAGCGAG 
GCGGAGGAGA GCCTCGTCGC CACCATCGGA TTCAGGTACG TGGGCGGCGC CATGCACGAG 
CAGGACCGGC TCGTGAACCC GCTCGGTTTC CAGGTGACGA GCTATCGGGT CGATCCCGAG 
ATCGCGGGCG GCGGGTGA 

 

Protein sequence

MRAGDLEQYL EESRGLERDY LEELVRSRRV AWRVAASAAV LVAAALATVV ALVPLKRVEA 
FVLRVDNATG AVDLVTTLRD GQAGYGEVVD RYFLNKYVLA RESYDYETLQ TAYDTTALMS 
SGEVQREYAG LFDGPKARDK VLANRVRIVV KVRSIAPGTT RNTAVVRFAT RAAHADGTSE 
AEESLVATIG FRYVGGAMHE QDRLVNPLGF QVTSYRVDPE IAGGG