| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1111 |
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| Symbol | |
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| ID | 7296508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 1245654 |
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| End bp | 1247183 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643593899 |
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| Product | type IV secretion system protein VirD4 |
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| Protein accession | YP_002491523 |
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| Protein GI | 220916219 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCCCG ACGATCGGAT GAAGGCGGGC GCCTTCCTCG TGGCCGGGCT GCCGCTCGCG
GCGTGGATCG CGGCGGCGTG GGCGACCGCC GAGATCGAGC ACCCGGGCCT GAGCCGGCTC
CTCCACCTCG CGACGCTCAC GGCCACGGGA GCGCGGCCGC TCCTTCTCGT CGCGGCGTTG
GGCGGTCTCG CCCTCGCCGT CGTGGTCATC GTCGTAGCGC GCAGGCTGGG GGCGGCCGGC
TTCGGCGGGG CTGCGTTCCG GCTCCACCTC CGCGGCACGA GGGTAGTGAG CGCGATGCGC
CTCGCTTGGT CCACCCGCGA GCGCAGGCGC CAGCAGATCA CCGTCGCGGG CGTACCGATG
CCGACGTCGG TAGAGACCCT CCACCTCCTC GTCGGCGGGT CGACTGGGTC CGGCAAGTCG
GTCCTCATCC GCGAGATGGC CTACTCGGCC CTCCTCCGCG GCGATCGCAT CGTGGTAGCC
GATCCGAACG GCGACATGCT CGCGAAGTTC TACCGGCCTG GCGACGTCAT CTTGAACCCC
TACGACTCGC GCGGTCTCGG CTGGACCTTC TTCAACGAGA TCAGGGCCGA GTACGACTTC
AAGCGCTTCG CCCTGTCGCT CGTCCCGCGA GGCCAGACGA AGGAGGAGGA GGAGTGGTGC
TCCTACGCTC GGCTCCTCCT GCGCGAGACC GCCCGGAAGC TCTCGCTCGT GGGCCAGCCG
TCGGTGGCCG AGCTGTTCCG CTGGACGACC ATCGCGAAGC CGGCGGACCT CCAGGCCTTC
CTCGCCCAGA CGGCGGCCGA GTCGCTCTTC GTCGGAGCCG ACAAGGCACT CGCGAGCGCC
CGCTTCGTGC TCTCGGCGAA ACTCCCAGAG CATCTCTCCA TGCCAGCCGG CGACTTCTCG
CTGCGTTCCT GGCTCGCCGA TCCCGCCGGC GGGAACCTCT TCATCACGTG GCGCGAGGAC
ATGGCCGAGG CGCTGAAGCC GCTCATCTCG GCCTGGGTCG ACGTGCTGTG CACCTCCATC
CTGTCGCTCG GCGAGGACCG GGAGCGGCGC GTCTGGATGT TCCTCGACGA GCTTGCGAGC
CTGGAGAAGC TGCCGAGCTT GGAGGACGCC GCGACCAAGG GCCGCAAGGC CGGGCTCCGG
ATCGTGGCCG GCCTCCAGTC GACCGCCCAG CTCGAGCGGA TCTACGGGCG CGAGGAGGCC
CAGACGCTCC GGAGCTGCTT CCGGTCGCTC GTCGTCCTCG GCGGCGCGAA GACAGATCCC
CGGACCTGCG AGGACATGAG CCAGAGCCTC GGCGAGCACG AGGTGGAGCG CGAGAGCTTC
AGCAGGACGA CCGGGCTCCG GGGCGACTCG ACTAGCAGCC AGCTCCAGCG CGCGCGGGAG
CGCGTCGTGC TCCCGTCCGA GATCGCGAGC CTCCCCGACC TGACCGGCTA CCTCGCGTTC
GCCGGGAACC ACCCCATCGC GAAGGTGAAG CTCGACGTGG TCCGTTTCCG GAACCGCGTC
CCGGCCTTCG AGGAGAGGCT GGCATGCTGA
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| Protein sequence | MHPDDRMKAG AFLVAGLPLA AWIAAAWATA EIEHPGLSRL LHLATLTATG ARPLLLVAAL
GGLALAVVVI VVARRLGAAG FGGAAFRLHL RGTRVVSAMR LAWSTRERRR QQITVAGVPM
PTSVETLHLL VGGSTGSGKS VLIREMAYSA LLRGDRIVVA DPNGDMLAKF YRPGDVILNP
YDSRGLGWTF FNEIRAEYDF KRFALSLVPR GQTKEEEEWC SYARLLLRET ARKLSLVGQP
SVAELFRWTT IAKPADLQAF LAQTAAESLF VGADKALASA RFVLSAKLPE HLSMPAGDFS
LRSWLADPAG GNLFITWRED MAEALKPLIS AWVDVLCTSI LSLGEDRERR VWMFLDELAS
LEKLPSLEDA ATKGRKAGLR IVAGLQSTAQ LERIYGREEA QTLRSCFRSL VVLGGAKTDP
RTCEDMSQSL GEHEVERESF SRTTGLRGDS TSSQLQRARE RVVLPSEIAS LPDLTGYLAF
AGNHPIAKVK LDVVRFRNRV PAFEERLAC
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