| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1081 |
|---|
| Symbol | |
|---|
| ID | 7300014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 1212574 |
|---|
| End bp | 1213980 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643593873 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_002491497 |
|---|
| Protein GI | 220916193 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCGT TCCCTTCCGC TGGTCCCCTC CTGTCCGCCG TGGTCGCCGC GGCCATCGCG
CTCCAGGGCT GCGCGCGCGA CGCATCGCCG CTCGAGCGCG CGGTCGCCGC GCCCGCCCCC
ACGACCGCCG CGCCGGCCCC CGCGACCCCG GCACCCGCTG CCCGCGAGGC GACCGAGGCC
TGGTGCGGGG AGCACGCGGT CCCCGAGGCG AAGTGCACGA AGTGCAACCC GCGGCTCATC
GAGCAGTTCA TCGCCGCGGG GGACTACTGC CGCGAGCACG GGTTCCCGGA GTCGGCGTGC
CCCTACTGTC ACCCGGAGCT GGTGACCGCG GCCGGGCACC CGCTGCCGGC GTTCCCCGCG
CCCGGCACGA AGATCCGCCT CGCGGGCCCC GAGACCGAGC AGGAGGCGGG GATCGAGACG
GTGCGCGCCG AGGTGCGCCC CTTCGCGGGC ACGGTGGACG TGGTCGGTCA GCTCGAGCTC
GACCAGAACC GCCTGGCCCG CCTCTCCGCG CGCGGTGACG CGACGGTGGT CGAGCTGAAG
GTGGACGCCG GCGAGGACGT CCGCCGGGGA CAGCCGCTCG TCGTGCTCGC GTCGGGCGCG
GTGGGCGGGG CGCAGTCGAG TCGCGTGGCG GCGGAGGCGC GCGTCGAGGC GGCCAGGAGC
GCGCTCGAGC GCGAGGAGCA GCTCGCGCAG AGCGGGATCA GCCCACGGCA GGACGTGGAA
CGGGCCCGCG CCCAGCTCGC GTCGGCAGAG GCGGAGCGCG ACGCCGCCCG CGCCGCGCTT
CGCGCCGCCG GCGCCGCCGA GTCGGGCCGG GGCGGCCGCT ATGCGCTGGT CGCGCCGTTC
GCCGGCACGG TGATCGCCCG CGACGCCGTC GCCGGGCGGA GCGTGGGCGA GGACGACGTC
CTCCTCGAGA TCGCGGACGT CCGGACGCTC TGGGCCGTCC TCGAGGTCCC CGAGGAGCAG
GCGGGGAGCG TCCGGCCCGG GCAGCGCGTG GCCCTGACCG TGGACGGGAG CGGTGAGCGC
CGGGAGGCGC GCGTCACCCG CGTGAGCCCG GCGGTCGACC GCCGGACCCG CACCGTCCGC
GTGCGGGTGG ACGTCGCGAA CGAGGACCGG ACGCTGCGCG CGGGGTCCTT CCTGCGCGCG
TCCATCGAGG TGAGCGCGCC GCGCGGCGCG CTGCTCCTCC CGCGCGACGC GGTCCAGCGC
GCGCAGGAGC ACGACCTCGT GTTCGTCCGG ACGAGGCCGG GCGAGTACGA CCCGGTGGAG
GTCCGCCTCG GCGTCCGCAC GCGCGACGAG GTCGAGGTGG TCGCCGGCCT GACGCCCGGG
GCCGAGGTGG TGACGGCCGG CGCGTTCGTC CTCAAGACCG AGATCCTGAA GGACTCGATC
GGCGCAGGCT GCGCCGACGG GCACTAG
|
|---|
| Protein sequence | MRPFPSAGPL LSAVVAAAIA LQGCARDASP LERAVAAPAP TTAAPAPATP APAAREATEA
WCGEHAVPEA KCTKCNPRLI EQFIAAGDYC REHGFPESAC PYCHPELVTA AGHPLPAFPA
PGTKIRLAGP ETEQEAGIET VRAEVRPFAG TVDVVGQLEL DQNRLARLSA RGDATVVELK
VDAGEDVRRG QPLVVLASGA VGGAQSSRVA AEARVEAARS ALEREEQLAQ SGISPRQDVE
RARAQLASAE AERDAARAAL RAAGAAESGR GGRYALVAPF AGTVIARDAV AGRSVGEDDV
LLEIADVRTL WAVLEVPEEQ AGSVRPGQRV ALTVDGSGER REARVTRVSP AVDRRTRTVR
VRVDVANEDR TLRAGSFLRA SIEVSAPRGA LLLPRDAVQR AQEHDLVFVR TRPGEYDPVE
VRLGVRTRDE VEVVAGLTPG AEVVTAGAFV LKTEILKDSI GAGCADGH
|
|---|
| |