Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_1013 |
Symbol | lpxC |
ID | 7297059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 1139342 |
End bp | 1140268 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643593806 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_002491430 |
Protein GI | 220916126 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.425665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCCT GGAATCAGCG AACGGTCGCG AAGCGGGTCT CCTGCACGGG GGTGGGCCTC CACTCCGGCC GGCCCGCGAC CCTGACGCTC GCGCCCGCCC CGGCCGACGC CGGCATCACG TTCGTCCGCA TGGACCTCGG CGTCGAGATC CCCGCGCGCA ACGAGCACGT GGTCGACACG ATGCTCTCGA CCTCGCTCGG CCGCGGCAGC GCCCGCGTGG CCACGGTCGA GCACGTCATG GCCGCGCTGC ACGGCATGGG CATCGACAAC TGCCGCGTCG AGGTGGACGG CCCGGAGATC CCGATCCTGG ACGGCTCCGC CGCGCCGTTC ACCTGCCTCG TGCAGGAGGC CGGCGTGAAG GTGCAGCCCG CCGGCAAGCG CTACCTGGTC GTCGACCAGG CCGTCGAGAT CCGCGACGGC GACAAGCTGG CGCGCCTCGA GCCCGCGGAG GGCTTCTCGG TCTCCTTCAC CGCGGACTTC GGCCACCCGC TCATCACCGA CCAGTCGTTC CAGGTGAAGC TGGGCGAGCG CGCCTTCGAG CGCGAGGTGG CCCGCGCGCG CACGTTCTGC TTCCGGCGCG ACATCGAGAA GATGCAGGCG ATGGGGCTGG CCAGGGGCGG CAGCCTCGAG AACGCCATCG TGGTGGACGA GTTCTCGATC CTGAACCCCG AGGGGCTGCG CTTCCCGGAC GAGTTCGCGC GGCACAAGGT GCTCGACGCG ATCGGCGACC TGGCGCTGTT CGGGCTCCCG GTGGTGGGCG CGCTCGTCGC GGTGAAGAGC GGCCACGCCA TGAACCAGGC GCTGGTGAAG AAGGTCCTGG CCGACCCCGC CTCGCATCGC GTGGTCCGGG TGACCGGCGA GGCCGACGCG CCGGCGCTCC GCGCGAAGGT GCCGGCCCTC GCGATCCACG AGGGCTCCGC GGCCTAG
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Protein sequence | MASWNQRTVA KRVSCTGVGL HSGRPATLTL APAPADAGIT FVRMDLGVEI PARNEHVVDT MLSTSLGRGS ARVATVEHVM AALHGMGIDN CRVEVDGPEI PILDGSAAPF TCLVQEAGVK VQPAGKRYLV VDQAVEIRDG DKLARLEPAE GFSVSFTADF GHPLITDQSF QVKLGERAFE REVARARTFC FRRDIEKMQA MGLARGGSLE NAIVVDEFSI LNPEGLRFPD EFARHKVLDA IGDLALFGLP VVGALVAVKS GHAMNQALVK KVLADPASHR VVRVTGEADA PALRAKVPAL AIHEGSAA
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