Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0991 |
Symbol | |
ID | 7297037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 1116528 |
End bp | 1117160 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643593784 |
Product | PHA accumulation regulator DNA-binding protein |
Protein accession | YP_002491408 |
Protein GI | 220916104 |
COG category | [S] Function unknown |
COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.454717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGACC AGCACACCGA AGGTACGGAC ACCAGCGCCG CCGTCGAGCC GAAGGTCATC AAGCGGTACA CGAACCGGAA GCTCTACGAC ACGGTGGAGT CCCGGTACGT CACGCTCGAC GAGATCGCCG AGATGATCAA GGGCGGTGCC GAGGTCAAGA TCATCGACAA CCGCACCAAG GAGGACCTCA CCTCCATCAC GCTCGCGCAG ATCATCTTCG AGGAGGAGAA GAAGACCTCC AAGATGAGCC TCGAGACGCT CCGGGACCTC ATCCGCCACG GCGGCGAGGT GGCCCAGCGG CTGGTGGTGG GGACGCAGGC CGAGCTCCGC GGGCGGGTCG AGGCGGTCCG GGCCGCGGCC GAGCAGCGGG TGCAGAACCT GATGGCGCGG AGCCAGGCCA CCGGCGATCG CGCCAAGGAG CTGATGGCCG CCTCGCAGGA GGCCATGGCG TCCCTCCAGC GCCGGGTCGA CGAGCGGGTG CGCGCGGCCG TGGACGGCGT CTCCAGCCTC TCCGAGGTGC GCCGGCAGCT CGACGAGATC ACCGCGCGCC TGCACGAGCT GGAGCGGAAG CTGGAGGAGT CGGCGCGCGA CGACCGGCCG CCGCCGCCGC AGGAGCCTCC CGCCGCGCAG TGA
|
Protein sequence | MSDQHTEGTD TSAAVEPKVI KRYTNRKLYD TVESRYVTLD EIAEMIKGGA EVKIIDNRTK EDLTSITLAQ IIFEEEKKTS KMSLETLRDL IRHGGEVAQR LVVGTQAELR GRVEAVRAAA EQRVQNLMAR SQATGDRAKE LMAASQEAMA SLQRRVDERV RAAVDGVSSL SEVRRQLDEI TARLHELERK LEESARDDRP PPPQEPPAAQ
|
| |