Gene A2cp1_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_0977 
Symbol 
ID7297023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp1102267 
End bp1102773 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content76% 
IMG OID643593770 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002491394 
Protein GI220916090 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGTGG ACGTCGATTC CTGGTACCGC GCGCACGGCG CGCGGGTGTT TCGCCGGTGC 
CGTCGGCTCC TGCGCGACGA CGAGAAGGCG GTGGACGCGA TGCACGACAC GTTCGTGAAC
CTGCTCCGCG CGGGCGATCG GGTGGACGGC GAGGCGCCGG CGTCGCTGCT CATGCGCATC
GCCACCCGGG TGTGCCTGAA CGTCCTGCGC GGCGAGCGCC GCCACCCCGC CGACCGCGAC
GAGCGGGTGC TGCTCGCCAT CGCGTCGGCG GAGGAGCCGG AGGCGCGCAC GCTCTCGCGC
GTCGCGCTCC ACCGGCTGCT CGGGCGCGAG CCGGAGTCCA CCCGCGTCAT GGCGGTGCTG
CACTGGGTCG ACGGGCTCAC GCTCGACGAG GTGGGCCGCG AGGTCGGGCT CTCCGGCGCG
GGGGTGCGAA AGCGGCTGAG GACGCTCCGC GCGCGCGTCG AGGCGCTGGC CGAGGACGGG
GCCGGCGTGG CGGAGGTGGC GCGATGA
 
Protein sequence
MTVDVDSWYR AHGARVFRRC RRLLRDDEKA VDAMHDTFVN LLRAGDRVDG EAPASLLMRI 
ATRVCLNVLR GERRHPADRD ERVLLAIASA EEPEARTLSR VALHRLLGRE PESTRVMAVL
HWVDGLTLDE VGREVGLSGA GVRKRLRTLR ARVEALAEDG AGVAEVAR