Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0952 |
Symbol | |
ID | 7298623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 1072224 |
End bp | 1073120 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643593745 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_002491369 |
Protein GI | 220916065 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCGCGG TGACCGTCGC CACCGCGCAG GCCCGCACCG CTCCGCAGCC GCTCGCCTAC CTCAAGGACC TGGTCCTCCT CTCGAAGCCG CGGCTCTCGG GCCTGGTGAT GATCACCAGC GCCGGAGGCA TGTGGCTCGC GCCCGGCCAC ATCGGCACCG CCCGCGCCGT GCTGACCGTC CTCGCCACCG CGGTGGTGGT CGGCGCCGCG AACGCGCTCA ACTGCTACCT CGAGCGCGAC ATCGACGCGC GCATGCGGCG GACCCGCGAT CGCCCGCTGC CCGCCGGCCG CGTCGATCCG TTCGTGGCGC TCGGGCTCGG CATCGCCGCC CCCGCCTTCG CGATCCCGAT CCTGTCGCTC GCCGCCAACG GGCTCACCGC CCTGCTCGCG CTGGTCGCGC TCCTGACCTA CGTGCTCGTG TACACGCCCA TGAAGCAGCG CTCCGCGGCC GCGCTGTTCG TGGGCGCGGT CCCGGGCGCC ATCCCGCCGC TCATGGGCTG GACGTCGGTG ACCGGCGGGG TGGACGCCGG CGGGCTGGCG CTGTTCGGGC TCCTGTTCGC GTGGCAGCTC CCGCACTTCC TCGCCATCTC GCTCTATCTC CGCGAGGACT ACCAGCGCGG CGGGCTGCGC ATGTTCGCCT CGGTGCACGG CGAGCGCGCC ACCCGGCTGT GGATGGCGCT GACCACGATC CTGCTCCTGC CCGCCTCGCT GGCGCTCGTC CCGCTGGGCC TGGCCGGCAC CGGCTACGCG GTGACCGCGG CGGTGCTGGG GATCGCGCTG TCCGCCTACG CCATCTCCGG CATCGGCCGC GAGGGCGGGC GCTGGGCGCG CACGTTCTTC CTCGGCACCC TCGTCCACCT CACGGTGCTG TTCGTGGCCC TCTTCCTCTC GCGCTGA
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Protein sequence | MLAVTVATAQ ARTAPQPLAY LKDLVLLSKP RLSGLVMITS AGGMWLAPGH IGTARAVLTV LATAVVVGAA NALNCYLERD IDARMRRTRD RPLPAGRVDP FVALGLGIAA PAFAIPILSL AANGLTALLA LVALLTYVLV YTPMKQRSAA ALFVGAVPGA IPPLMGWTSV TGGVDAGGLA LFGLLFAWQL PHFLAISLYL REDYQRGGLR MFASVHGERA TRLWMALTTI LLLPASLALV PLGLAGTGYA VTAAVLGIAL SAYAISGIGR EGGRWARTFF LGTLVHLTVL FVALFLSR
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