| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0939 |
|---|
| Symbol | |
|---|
| ID | 7298610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 1057492 |
|---|
| End bp | 1059753 |
|---|
| Gene Length | 2262 bp |
|---|
| Protein Length | 753 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643593732 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002491356 |
|---|
| Protein GI | 220916052 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACGC CTGGAAAGCC CCTCACGCCC GCCGAGCTGT CGGCGCTCGA GCACGCCTTC
GCCTCCGACC CCGGCTCGGA CGCCTATCGT CCCTTGACCG AGGCATACCT CGCCGCCGGT
CGCTTCATGG AGGCGATGGT CGTCTGCAAG AAGGGCGTGA AGGCGCACCC GGACGATCCC
GCCGCCAAGG TGCTGCTGGC GCGCGTCTAC GCCGAGCAGG GGAAGGACCG GAAGGCGCTC
GAGGAGCTCG GCGCGGTCCT CGCGGCGTTC CCGACCTTCG CGGCGGCGAA CCAGCTCGCC
GGCGTGCTCC ACCTGCGGCT CGGTGAGCGC GAGGCGGGCG AGGCGGCGCT GCGCCGCGCC
GCCGACGCCG CGCCGAACGA TCCGGAGATC CGTGCGCTGC TGGAGAAGCA CGGGATCGGC
CCCGCGTCGC CCGCCGCGCC CGCGACGCCT CCGCGGCCGG CCGCGCCGGC GGCGTCCGCA
GGGGGGCCGC CCGTCGCCCC GCGCGTCGCC ACGCCGGGCC AGCGCCCGCC TGCTCCCCCG
CCGGTCACGG CGCAGGCGCC GGCGGCTCCG CGCGAGCGGT CGGAGGAGGT GCCGCTGCCC
ACGCCGCCGC CCGCGCGCGC GAGCGGCGCC GCGTACGCGC AGCAGCTCGC GGAGAAGTAC
GGCACCCAGA CGTTCCAGAT CCCGCACGCG CGGCAGCAGC CGAAGCGCGC CGGCCGCGGG
CCCATCGTCG CCACGGTGGC GCTCGCCGCC GCGCTGGCCG TGGCGCTGGG CGGCTGGGCG
CTCTACAGCA AGGCGCGCAA GGAGCGCATC GAGGCCATCG ACCGGCTGCT CCGCGAGACG
CGCGAGCTGG TGGATCGCGA CGCCTACGCC GCCTACGGCG AGGCCGCGGC GAAGCTCCAG
GAGATCCTGA AGCGCGACCG CGACGCGCTC GCGGGCCACG CGTTCCTCGC GTACGTGGAC
GCGATCCGCT GGGCGGAGCA CGGCGACGGC GACGCGGTGC GCGACGAGGC GATGCGCCAC
GTGGACGCGG CGCGAAAGCT CGGGCGCCAC TCGCACCTGG TCGCGGCGGA GGCGTACCTG
CGCGCGAGCT CGGGCGACGC GGCCGGCGCG AAGCAGGCGC TCGACGCGGT GCTGGGCGGC
GAGGACGGCT CGCAGAGCCC GTTCCTGCTC GCGGTGCTCG GCGCGGTGCA GCTGCGCGCC
GGCGATCTCG ACGCCGCGCG CGACGCGCTC ACCCGCGCGC AGAAGGCGAA CCCCGGCGAC
GCGCGCACCG CCTGGCTGCT GGCCGAGCAG TTCCGGCGGC GCGGCGAGGG CTACGAGCTG
CAGGCGTCGG GCTACTACGA CTACGCGCTG CGGATCCAGA AGGAGCACCT CCCGTCGATC
CTGGGCAAGG CGCTGGTGGT GCTCGGCCGC GGCCAGCTCG ACGAGGCGGC CCGCGCCGCC
GCGCTGGTCC TCGCGCCGCA GGCCGGCGCG TCGAAGCCGC AGCAGGCGCT GGCGCACGCG
GTGCGTGCCG GCGTGCTCGC CGCGCACGGC AAGGCCGCCG AGGCGGCCTC GGAGGAGCAG
GCCGCGGCGA AGCTCGACCC GGCCAGCCCG GAGATCCCGT GGCTGGTGGG GCAGCGCAAG
CAGCGGGCCG GCGACGCCGC CGGCGCGGTG GAGGCGTTCC AGCGCGCCGT GTCGCTCGAC
GACCGCCGCG TCTCGCTCTA CGCCGACCTG GTGCGGGCGC AGCTCGCGCA GGAGGGCGGC
GCGCAGCGCG CCCTGGAGAC GCTGAAGCGG GCCGTGGCGC GCGTGGGCGA GAGCCCGCGC
CTCGCGCTGC TGCTCGGCGA CGCGTACCGT GCCGCGGGCG ACGCCGACCT GGCGCGGGGC
CAGTACGAGA AGGCCATCGC GCTCGGCAAG CCGTTCCCCG ACGCGCGGGT GGCGCTGGCG
CGGCTGCACC GCGATCGGAA CAACGTGCCC GGCGCGCTGG TGGAGCTGAC GCAGGCCATC
GACGAGTACG GCCAGGGCGG CGCCGGCGGC GCGGCCGCCG CCTACGTCGA GATGGCGGAC
GTGGAGCGCG CGCGCGGCGC GCGCGCCGAG GTCGTGGCCG ACCTGTACCG CAAGGCGCTC
GACAAGGACC CCGCGAGCTG CGAGGCGCTC TGGGGCGCCG GCAAGCTCGA GCACGACGCG
AACAAGCTGG CGGACGCGAA GACCAAGCTG GGCACCTACG CAAAGCTCTG CCCGCGCGGG
CCGCACGCGG CCGAGGCCGC GCGCCTGGCG GGCGGGAACT GA
|
|---|
| Protein sequence | MRTPGKPLTP AELSALEHAF ASDPGSDAYR PLTEAYLAAG RFMEAMVVCK KGVKAHPDDP
AAKVLLARVY AEQGKDRKAL EELGAVLAAF PTFAAANQLA GVLHLRLGER EAGEAALRRA
ADAAPNDPEI RALLEKHGIG PASPAAPATP PRPAAPAASA GGPPVAPRVA TPGQRPPAPP
PVTAQAPAAP RERSEEVPLP TPPPARASGA AYAQQLAEKY GTQTFQIPHA RQQPKRAGRG
PIVATVALAA ALAVALGGWA LYSKARKERI EAIDRLLRET RELVDRDAYA AYGEAAAKLQ
EILKRDRDAL AGHAFLAYVD AIRWAEHGDG DAVRDEAMRH VDAARKLGRH SHLVAAEAYL
RASSGDAAGA KQALDAVLGG EDGSQSPFLL AVLGAVQLRA GDLDAARDAL TRAQKANPGD
ARTAWLLAEQ FRRRGEGYEL QASGYYDYAL RIQKEHLPSI LGKALVVLGR GQLDEAARAA
ALVLAPQAGA SKPQQALAHA VRAGVLAAHG KAAEAASEEQ AAAKLDPASP EIPWLVGQRK
QRAGDAAGAV EAFQRAVSLD DRRVSLYADL VRAQLAQEGG AQRALETLKR AVARVGESPR
LALLLGDAYR AAGDADLARG QYEKAIALGK PFPDARVALA RLHRDRNNVP GALVELTQAI
DEYGQGGAGG AAAAYVEMAD VERARGARAE VVADLYRKAL DKDPASCEAL WGAGKLEHDA
NKLADAKTKL GTYAKLCPRG PHAAEAARLA GGN
|
|---|
| |