| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0935 |
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| Symbol | |
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| ID | 7298605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | + |
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| Start bp | 1052813 |
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| End bp | 1055182 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 643593727 |
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| Product | DNA ligase D, 3'-phosphoesterase domain protein |
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| Protein accession | YP_002491352 |
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| Protein GI | 220916048 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0727399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGACC GGCTGGAGCG ATACCGCGCC ATGCGCGACC CGGGCCGGAC GCCGGAGCCG
TTCGGCGGCG GTGCGCCCGG CGAGGACGGA TCCGGCTCGG CGCGGGCGTT CGTCGTCCAG
AAGCACGCGG CCCGGCGCCT CCACTGGGAC TTCCGGCTCG AGCTGGGCGG GACGCTGCGG
AGCTGGGCGG TGCCGAAGGG CCCCTCCGCC GATCCCTCCG ACCGGCGCAT GGCCATCGAG
GTGGAGGATC ACCCGGTCGA GTACGCGGAC TTCGAGGGGA TCATCCCCGC CGGCAACTAC
GGCGCAGGGG CGGTGATCGT GTGGGATCGC GGCGCGTGGT GGCCGGTGGG CGATCCCGAG
GACGGCCTGG CCCGCGGCAA GCTCGTGTTC CGCCTGAGGG GCCACAAGCT GCGCGGAGAG
TGGACGCTGG TCCGGACCCG CGCCGGGGAC GGCGGGAAGC GCCAGTGGCT GCTCCTGAAG
CACCGCGGCG ATCCGTTCGC CGGGCCGGGG CGGCCGTTCC CGGAGGCGTC CGTGCTCTCG
GGGCGCACCG TGGAGGAGCT CGCGGCCGGC ACGAGCCGGG CCGAGGCCGC CGCCCGCGAG
GCCGCGCGCC TCGGCGCGCC GGCGCGTCCG CTCCCGCGGC GGGGGCCCGC GCCGATGGCG
CCGGGCGCGC GCCGGGCGCC GTTCGACCGC GCGGGCTGGC TGTTCGAGGT GGCGCAGGGC
GGCCAGCGCG TGTCGGCGCG CCGCGAGGGC ACCGGGGCGG TGCTGCGCTC GCCGCAGGGT
GAGGACCTCG GGCCGCGCTT CCCGGAGGTG GCGCTCGCCG TGGCGCTCCT GCCCGGCGAT
CCGGTGCTCG ACGGCGAGCT GGTGGTGCTC GACGACGAGG GGCGGGCGTC GGCCGAGGCG
CTCGAGGCTC GCGCCCGCAC CGGCGCGAGC GCGGCCGCCG GCGCCGCGCT GCAGCGGCCG
GCGACGCTGT TCGCGTTCGA CCTCCTGGCC CTGGGTGGGC GCGACCTGCG CGCGCTGGCG
CTCGCCGACC GCAAGCGGCT GCTCGCCGAG GTGGCGCCCG CGGTCGGCTC GGTGCGCTTC
GCCGGCCACG TCGAGCGCGA GGGGAAGGCG CTCCACCGCG AGGCGGCGGA CCGGGGCCTC
CCCGGCGTGC TCGCCCGGCG GGCCGCGGCG CCCTACCGGT CCGGCCGATC CGCCGACTGG
GTGCTCGTGC CCGCCGCCCG GAGCGCGGCC CCGCGCCCGC CGGCGCCGCG CCCCCGGGGC
GACGCGCCGG CCGCGACCGG CGCCGTCCCG GTGGAACGCA CCGTGAACGT GGTCCATCCG
GAGAAGGTCT GGTTCCCGGA GGACGGGATC ACGAAGGGCG AGCTCGTCGC GTACCACCGG
GCCATCGCAC CGTTCATGCT GCCGTACCTG GCCGATCGTC CGCTGGTGCT CACCCGGTTC
CCGGAAGGCA TCCACGGTCG CAGCTTCCTG CAGGAGGACG CGCCGGCGTG GCGGCCGCGC
TGGTTGCGCG CGGCGACGGT GCACGCAGGG GAGGGGGGCC GCACCCTCGA TCACCTCCTG
GTGGACGACG CCGACGGCCT CGCCTGGCTG GTGGATCAGG GCGCGATCCC GCTCGACGTG
CTGGCGGGCC GCGCCGGCGC GCTGGAGCGG CCGGACTGGT GCGTGCTGGA GCTCGACGCG
GGCGACGCGC CGTTCGCGCA GGGGGTGCGG GTGGCGCGCG CGCTCCACGC GCTGTGCGAC
GCCGCCGGGC TGCCGAGCCA CGTCAAGACC ACCGGCGAGC GGGGGCTGCA CGTGCTCGTC
CCGCTCGGCG GCCAGCTCAC GCACGCGCAG GCCCGCACGC TCGCCGAGCT GCTGGCGCGG
ACGGTGGAGG CCGAGCTGCC GGACCTGGCC ACCACCGCCC GCACGGCCGC GGCGCGCGGC
GGCCGCGTGC ACGTCGACGC GCTGCGGAAC GGCCACGGCA CCGCCATCGC GGCGCCGTAC
ACGGTGCGCC CGAGGCCGGG GGCGCCGGTG TCCACGCCGC TGCGCTGGAG CGAGGTGAAT
GCCCGCCTGG ACCCGGCGCG GTTCACCGTG CGCACGGTGC CTGCGCGCGT GGCCCGGCTC
GGACGCGATC CGCTCGGGCC GGTCCTGACC GAGCGCCCGG ATCTGCTGCG CGCGCTCGCG
CGCCTGCGGG CGCGGCCGGG TGCGGTCGGG TGCGGTCGGC CGGCGCGCAG CGCGCCGTTC
GTGACGCGCC GCACGCCTGG GGATGCGACC CGCCGCCGCG CGCGCCGCCT CGTGGTGCCG
GCGCGCATGT GGGGACAGGT GGCCGAACCC CGCCCGGGGG GCGACTTTGC GGCAATGTGC
CGGCCGACGC GCAATCGTTC GCGCCAATGA
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| Protein sequence | MPDRLERYRA MRDPGRTPEP FGGGAPGEDG SGSARAFVVQ KHAARRLHWD FRLELGGTLR
SWAVPKGPSA DPSDRRMAIE VEDHPVEYAD FEGIIPAGNY GAGAVIVWDR GAWWPVGDPE
DGLARGKLVF RLRGHKLRGE WTLVRTRAGD GGKRQWLLLK HRGDPFAGPG RPFPEASVLS
GRTVEELAAG TSRAEAAARE AARLGAPARP LPRRGPAPMA PGARRAPFDR AGWLFEVAQG
GQRVSARREG TGAVLRSPQG EDLGPRFPEV ALAVALLPGD PVLDGELVVL DDEGRASAEA
LEARARTGAS AAAGAALQRP ATLFAFDLLA LGGRDLRALA LADRKRLLAE VAPAVGSVRF
AGHVEREGKA LHREAADRGL PGVLARRAAA PYRSGRSADW VLVPAARSAA PRPPAPRPRG
DAPAATGAVP VERTVNVVHP EKVWFPEDGI TKGELVAYHR AIAPFMLPYL ADRPLVLTRF
PEGIHGRSFL QEDAPAWRPR WLRAATVHAG EGGRTLDHLL VDDADGLAWL VDQGAIPLDV
LAGRAGALER PDWCVLELDA GDAPFAQGVR VARALHALCD AAGLPSHVKT TGERGLHVLV
PLGGQLTHAQ ARTLAELLAR TVEAELPDLA TTARTAAARG GRVHVDALRN GHGTAIAAPY
TVRPRPGAPV STPLRWSEVN ARLDPARFTV RTVPARVARL GRDPLGPVLT ERPDLLRALA
RLRARPGAVG CGRPARSAPF VTRRTPGDAT RRRARRLVVP ARMWGQVAEP RPGGDFAAMC
RPTRNRSRQ
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