Gene A2cp1_0901 details

Gene Information

• Locus tag: A2cp1_0901
• ID: 7298571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: -
• Start bp: 1019631
• End bp: 1021532
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 81%
• IMG OID: 643593694
• Product: PDZ/DHR/GLGF domain protein
• Protein accession: YP_002491319
• Protein GI: 220916015
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0793] Periplasmic protease

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.757724
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAGCC CCCGCCGCAC CGCGTTCCTC GCCCTCGGCC TGGCCCTCCT CGCGCTGCTG 
CTCGCGGCCG CGCTGCTGCG GCGGACCGCA CCGGACGAGC CCGGCCCCCA GGGCGCGCCG 
GCGCCCACCG CCGGGGTCCG GCCCGCGCCC GCGGCGCGAG CGCCCGAGGC CCCTCCCCCG 
ACCGCCCTGC CCATCCGCGT GCCCCCCGCC GCGCCGGCCC CGCCCGACGC CGCGCCGGCC 
AGCTTCGAGG GGAAGGTGGT CGCGGCGGGG TCCGGCGCCG GCGTGCCCGG CGCGGAGCTG 
ACGTTCTCGC GCGCGGGCGC GGCCGCGTCG GTGCGGGCGG GGCCCGACGG CGCGTTCCGC 
TTCGAGCCGC CGGAGACCGG GCGCTGGCTG CTCGCGGCGG TCACCGCTCC CGGGTTCCTG 
CCGTTCGCGC CGGAGTGGGG CCACAGCCCG GTCCAGCTCG ACGCCGCGGC GGGCCGCCAC 
GTGCGCGGCA TCGAGATCCA CCTCGCCCAG GCGGCGGAGC TCGAGGGCCA CGTCGTCGAC 
CGGGACGGCG CGCCGGTGGC GGGCGCCGAC GTCCGCCTGC TCGGCGCCGC GGGCGAGGCG 
GCGCTGGTGC CCATCCCCGA CCACTTCACC AGCGACGCGC GGGGCGCGTT CCGGTTCGCG 
GCGCCGGAGG GCGCGGTGCT GGAGGCGCGC AAGGACGGCT TCCTCCCCGG GCGCGCCGAC 
ATCGGCCCGC TCGAGCGCGT CAACGGGCGC GTCACGGTGG AGCTCGGCCC GGCGCACCGT 
CCGCTGGGGG AGCGCGCCCC GGTGGCGGGG CGCGTGATCG CGAAGGGTGG TTCCCCCATC 
GCCGGCGCGC TGGTGACCGC GTCGCCGGAG CGCGTCCTCG GGCTGGACGA CGCCCCCACG 
GCCCAGGTGG TCACCTCGGC CGACGGCCGC TTCGAGCTTC CGCCGCTCGA CCCCGGCGCC 
TACCGCGTGC GGGCGCGCGC CGAGGGCCGC GCGCCGGCCG CGCTCCGCCG GGTCGCGCCG 
GGCGCGAAGG ACCTCGTGCT CGAGCTGGCC GCCGGGGGAC GACTGCGCGG GTGCGTGCGA 
TCCGCGGCCG CCGGCGCGCC GGTGGCGCCG TTCACGGTGC TGGTGCTGGA GCGGCGCGGC 
CCGCTCCGGC TGGTGCCGCA GCGGACGCGG TCCGTCATCG ATCCCTCGGG CTGCTACGCG 
CTCGACGACC TCGCCCCCGG CCCTGCGACG GTGGTGATCA CCGCGCCGGG CTACGCGCCG 
TCCGGCGAGC GCGCGGTGGA GATCCCGGGC GACGGCGGCG AGGCGGTGGT GGACGCGGCG 
CTGGAGTCCG GGGGGCGGCT GACCGGGGTG GTGCGCGACG ACGCCACCGG CGCGCCCATC 
GCCGGCGCAC GGCTCTCGGT GGAGGGCGCG CTGCCGAGCG CCGCGGCGTC CACGTTCCCG 
GTGCTGTCGG AGGCGGTGAG CGGGACGGAC GGGACGTTCG CGCTCGCGGG GCTGCCGGCG 
CGCTCCTCGA TCTTCGTGGC CGCGGCCGGC CACCACGCGC GCGTGCTGGG CGGCGTGCAG 
GTCGAGCCGG GCGGGACGGC CGGGCCGGTG GAGGTGCGGC TCCGTCCCAC GGCGGACGGC 
GAGGAGCCGC GGGTGGATCT GGCCGGCATC GGCGCGGTGC TGGCGCCGTC GGGCGACGGC 
CTGGCGGTGG CGCAGGTCAT CGCCGGCGGC GGGGCCGCCG AGGTGGGGCT GGGCCGCGGC 
GACCTGGTCG TGGAGGTGGA TGGGCGCCAG GTGGCCGAGC TGGGCATGGC CGGCGCGATC 
GACGCGATCC GCGGCCCGGA GGGCACGTCG GTGCTGCTGA AGGTGCGGCG CGGCACGTCC 
ACGTTCGACG TGCGCGTGCC CCGGCGGCTG GTGCGCGGAT AG 

 

Protein sequence

MQSPRRTAFL ALGLALLALL LAAALLRRTA PDEPGPQGAP APTAGVRPAP AARAPEAPPP 
TALPIRVPPA APAPPDAAPA SFEGKVVAAG SGAGVPGAEL TFSRAGAAAS VRAGPDGAFR 
FEPPETGRWL LAAVTAPGFL PFAPEWGHSP VQLDAAAGRH VRGIEIHLAQ AAELEGHVVD 
RDGAPVAGAD VRLLGAAGEA ALVPIPDHFT SDARGAFRFA APEGAVLEAR KDGFLPGRAD 
IGPLERVNGR VTVELGPAHR PLGERAPVAG RVIAKGGSPI AGALVTASPE RVLGLDDAPT 
AQVVTSADGR FELPPLDPGA YRVRARAEGR APAALRRVAP GAKDLVLELA AGGRLRGCVR 
SAAAGAPVAP FTVLVLERRG PLRLVPQRTR SVIDPSGCYA LDDLAPGPAT VVITAPGYAP 
SGERAVEIPG DGGEAVVDAA LESGGRLTGV VRDDATGAPI AGARLSVEGA LPSAAASTFP 
VLSEAVSGTD GTFALAGLPA RSSIFVAAAG HHARVLGGVQ VEPGGTAGPV EVRLRPTADG 
EEPRVDLAGI GAVLAPSGDG LAVAQVIAGG GAAEVGLGRG DLVVEVDGRQ VAELGMAGAI 
DAIRGPEGTS VLLKVRRGTS TFDVRVPRRL VRG