Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0846 |
Symbol | |
ID | 7299395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 949924 |
End bp | 950802 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643593639 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002491264 |
Protein GI | 220915960 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAACCA GCGACGCCAC CCTGATCGAC CGCGCCCGGA CCGGCGACCG CCGTGCGCTC GACGAGCTGC TCACGCGCCA CCAGCGGCGC GTCTACCGCT TCGGCCTGAA GATGTGCCGG GATCCGGAGG ACGCGAAGGA CATCCTCCAG GAGACGCTGC TCGCGGCCGC ACGCACGGTG AAGGACTTCC GCGGCGCGTC GTCGGTCTCG ACGTGGATGT ACACGATCGC CCGGAGCTTC TGCATCAAGA AGCGCCGCCG CTCGAAGTTC GCGCCGGCCG AGGAGACCTC CCTCGACCAG CGCGAGCCGG GGGCCGAGGC GCGGCAGGTC GCGGACCCCG GGCGCACGCC GGACGAGTCG CTCGCCGGGC GCCAGATCGA GCAGGCCCTG GAGACCGCCA TCGGGCGCCT CGACCCCATG TACCGCGAGG TGCTGGTGCT GCGGGACGTC GAGGGGCTCT CCGCCCCCGA GGTCGCCGAG GTGATGGGCC TGAGCGTGGA GGCGGTGAAG AGCCGGCTCC ACCGGGCCCG CGTGGCCGTG CGCGAGGCGC TGGTGCCGCT CCTCGGGATC CCGGAGGCCC CGGCCGCGGC CGCGCCTGAG GCCGCGCCCG CGGCGCGACC GGCCGCGCCG TCCGGTCCCG ACGTCACCTG CCCGGACATC GTCCAGCTCT TCTCCCGCCA CCTCGAGGGC GAGATCAGCG CGAACGTGTG CGCCGACATG GAGAAGCACC TGGCAGGCTG CCCGGCGTGC CAGTCGCGCT GCGACTCCCT CCAGCGCACC CTGGCGCTCT GCAAGGCCGC GCCGATGCCC GAGGTGCCGG CGAAGGTGCA GGCGTCCGTG CGCCAGGCGA TCAAGAAGTT CGTCGAGCTG CACTCCTGA
|
Protein sequence | METSDATLID RARTGDRRAL DELLTRHQRR VYRFGLKMCR DPEDAKDILQ ETLLAAARTV KDFRGASSVS TWMYTIARSF CIKKRRRSKF APAEETSLDQ REPGAEARQV ADPGRTPDES LAGRQIEQAL ETAIGRLDPM YREVLVLRDV EGLSAPEVAE VMGLSVEAVK SRLHRARVAV REALVPLLGI PEAPAAAAPE AAPAARPAAP SGPDVTCPDI VQLFSRHLEG EISANVCADM EKHLAGCPAC QSRCDSLQRT LALCKAAPMP EVPAKVQASV RQAIKKFVEL HS
|
| |