| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0836 |
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| Symbol | |
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| ID | 7299385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 936643 |
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| End bp | 938694 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 643593629 |
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| Product | DNA ligase D |
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| Protein accession | YP_002491254 |
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| Protein GI | 220915950 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCCT GCCCCGCCGG CGCCCGCCGG GGGCGCCGCT TGCCCCGCCA CGCCGGGGGT
GGTGAGCTTT CCCGCGTGGC CCGCGCGCCC GTCCCGATCT ACCGCGCCCA GCTCGCGACG
CTCGTCGCGA CCCCGCCGGC GGGGGACGGC TGGGTCCACG AGACGAAGTA CGACGGCTAC
CGGATCGGCT GTTCGCTGGA GGGCGGGCGC GCCACGCTGT GGAGCCGGCG GGGCAACGAC
TGGACCGCGC AGTTCCCCGA GGTGGCGCAG GCCGCCGAGG CGCTGGCGGC GCGGAGCGCG
CTCCTCGACG GCGAGGTGGC GGCGGTGCTG CCCGGCGGCC GGACCAGCTT CCAGGCGCTC
CAGCAGGCGT TCTCCGGGGG CCGCCGCTCG CTCGCCTACT TCGTGTTCGA CCTGCTCTGG
CTGGACGGCG AGGACCTGTC CGGGCGGCCG CTGCTCGAGC GCAAGGACGC GCTGCGCCGG
CTCCTCGGCG CGCGCGGCGC CGTGCTCCGG TACGCGCCGC ACGTGGAGGC GCCGGGCGCC
GAGGTGCTCC GCGAGGCGTG CCGCCTCGGC CTGGAGGGGA TCGTCTCGAA GCGCGCCGAC
GCGCCGTACC GCCCCGGGCG GAACACCACC TGGACGAAGG CGAAGTGCCT CGCCCGCCAG
GAGCTGGTGA TCGGCGGGTT CACCGATCCC GAGGGCAGCC GCCAGGGCAT CGGGGCGCTG
CTGGTGGGCT TCCACGAGGG CGGCGCGCTG CGCTTCGCCG GGAAGGTCGG CACCGGCTTC
ACGCAGGCGT CGGCGCGGGC GCTGCGCGCG CGCCTCGATC GCCTGGGCCG CGCCGACCCG
CCGTTCACGC CCCGGCCGCC GGGCGCGCTC GGGCGGATCG CGCACTGGGT GCGGCCGGAG
CTGGTGGCCG AGGTGGCGTT CACCGAGTGG ACCGACGACG GGAAGGTGCG GCATCCGTCG
TTCCAGGGGC TGCGCGAGGA CAAGCGCGCC GCGGACGTGG TGCGCGAGGT CCCCGGCGGC
GCGCCACCGG CCCCGCCGGT CCCACCGGCG CCTGCGCCTG CGCCGGCGGC CGCGGGTCGC
GCCAGGCGCC GCGCGGCGGC GGGCGCAGCC GGCGAGGTGG TGATCGGCGG CGTCCGGCTC
TCGCACCCGG AGCGCACCGT GTTCCCGGGC GACGGGCGGG CCGCGCTCAC CAAGGCCGAC
GTGGCCCGGT ACTACGACGC GGTGGCCGGC GCGATGGTGC CGCACCTGCG CGGCCGCCCG
CTGACCCTGT TCCACTGCCC GGAGGGCATC GCCGGCGAGT GCCGCTTCAT GAAGCACTCG
AAGACCTGGG CGCCGCCCGC CGTGCGGCGG GTGCGCATCC AGGAGAAGAC CAAGCTGGGC
GAGTACCTGA TCGCCGACGA CCGCGCCGCG CTGCTCGCGC TGGTGCAGAT GGACGTCCTC
GAGCTGCACA CCTGGAACTC GACCGTGGAG GCGCTGGAGC AGCCGGACCG GATCGTGCTC
GACCTCGACC CGGGGCCGGA GGTCCCGTGG CGCGAGGTGG TGCGCGCGGC GCGGCTGCTG
CGCTCGGCGC TGGAGGCGCT GGGCCTCGCC GCGTTCGTGA AGACCACCGG CGGCGCGGGG
CTGCACGTGG TGACGCCGCT GGTGCCGCGC CGGCGCTGGG AGGACTGCCT CGCGTTCGCG
CGCGGGCTCG CCGCCACGGT GGCGCGCCAC GAGCCGCGCG CGTTCACCGT GGCGCTCGCG
CGCGCCGGGC GCGAGCGGAA GATCCTCCTC GACTACCTGC GGAACAACCG GACCAACACC
TCGGTGGCCG CGTTCTCGCT GCGCGCGCGG CCGGGCGCGC CGGCCTCGGT GCCGGTGGCC
TGGGACGAGC TGGGCCCGCG GCTGCGGCCG GAGCGGCTGG ACGCGCGCAC CGTCCCGCGG
CGGCTGGCGC GGCTCGGCGC GGATCCGTGG GCCGGCTGGG CGCGCGCCGC CCGGCCGCTC
GGCGACGCGC ACCTCGCCGC GGTGGGCGCC GCGCCGGTGG ACCAGCCGGC GCGGGGCGGG
GGGCGGCGGT GA
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| Protein sequence | MPACPAGARR GRRLPRHAGG GELSRVARAP VPIYRAQLAT LVATPPAGDG WVHETKYDGY
RIGCSLEGGR ATLWSRRGND WTAQFPEVAQ AAEALAARSA LLDGEVAAVL PGGRTSFQAL
QQAFSGGRRS LAYFVFDLLW LDGEDLSGRP LLERKDALRR LLGARGAVLR YAPHVEAPGA
EVLREACRLG LEGIVSKRAD APYRPGRNTT WTKAKCLARQ ELVIGGFTDP EGSRQGIGAL
LVGFHEGGAL RFAGKVGTGF TQASARALRA RLDRLGRADP PFTPRPPGAL GRIAHWVRPE
LVAEVAFTEW TDDGKVRHPS FQGLREDKRA ADVVREVPGG APPAPPVPPA PAPAPAAAGR
ARRRAAAGAA GEVVIGGVRL SHPERTVFPG DGRAALTKAD VARYYDAVAG AMVPHLRGRP
LTLFHCPEGI AGECRFMKHS KTWAPPAVRR VRIQEKTKLG EYLIADDRAA LLALVQMDVL
ELHTWNSTVE ALEQPDRIVL DLDPGPEVPW REVVRAARLL RSALEALGLA AFVKTTGGAG
LHVVTPLVPR RRWEDCLAFA RGLAATVARH EPRAFTVALA RAGRERKILL DYLRNNRTNT
SVAAFSLRAR PGAPASVPVA WDELGPRLRP ERLDARTVPR RLARLGADPW AGWARAARPL
GDAHLAAVGA APVDQPARGG GRR
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