Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0793 |
Symbol | |
ID | 7299179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 894270 |
End bp | 895118 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643593586 |
Product | RNA polymerase sigma factor SigJ |
Protein accession | YP_002491211 |
Protein GI | 220915907 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0332224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGGCG CGGCCAGGGA TTTCGAGCCG CACCGGCCGG ATCTGGTGCA GGTCGCCTAC CGGATGCTGG GCTCGGTGGC CGAGGCGGAG GACGTGGTGC AGGACGCGTT CCTGCGCTGG AACGCCGCGC CGCGCGACGG GGTCGAGTCG CCGCGCGCGT TCCTCATCTG CACGGTCACG CGGCTCTGCC TCGACCGCCT GAAGTCCGCG CGCACGCAGC GGGAGGAGTA TGTCGGGACC TGGCTGCCGG AGCCGCTGGT GGAGGCGGAG GGCACGGGGC TGGCGCACGA CCTCTCGATC GCGCTGCTCG TCACCCTGCA GCGCCTCTCG CCGCTCGAGC GCGCCGCGTT CCTGCTCCAC GACGTGTTCG ACATGGAGTT CGCGGACGTC GCGGGCGTGC TGGCGCGCTC CGAGGCCGCG GTCCGCCAGC TCGCGGCGCG CGCGCGGGGG CACGTGCGCG AGGCGAGGCC GCGCTTCCGC GCGTCCGACG AGGAGGCGCG GCGACTCGCC GACGCCTTCC AGGCGGCGCT GACGAGCGGC GACCTCGGGA CGCTCTCGAG GCTGCTCGCG GAGGACGCGG TGTTCTACGC GGACGGCGGC GGCAAGCGCG CGGCGGTGCT CCAGCCGATC GAGGGCCGGG CCGCCATCGT GGAGTTCCTC TCGAAGATCG TGAAGCACCC CTCGTTCCCG GGCGCGAAGG CCTACCAGCG CGCCTGGATC AACGGCATGC CCGGATTCGT GGTGCACGGT CCCGAGGGCG TCGAGACCCT GGCGATCGAG ATCGGCGACG GGCGCGTGGT GGGGATCTAC GCCGTCCGCA ACCCGGACAA GCTCCGCCAC CTCTCGTAG
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Protein sequence | MTGAARDFEP HRPDLVQVAY RMLGSVAEAE DVVQDAFLRW NAAPRDGVES PRAFLICTVT RLCLDRLKSA RTQREEYVGT WLPEPLVEAE GTGLAHDLSI ALLVTLQRLS PLERAAFLLH DVFDMEFADV AGVLARSEAA VRQLAARARG HVREARPRFR ASDEEARRLA DAFQAALTSG DLGTLSRLLA EDAVFYADGG GKRAAVLQPI EGRAAIVEFL SKIVKHPSFP GAKAYQRAWI NGMPGFVVHG PEGVETLAIE IGDGRVVGIY AVRNPDKLRH LS
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