Gene A2cp1_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_0793 
Symbol 
ID7299179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp894270 
End bp895118 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content74% 
IMG OID643593586 
ProductRNA polymerase sigma factor SigJ 
Protein accessionYP_002491211 
Protein GI220915907 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0332224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGCG CGGCCAGGGA TTTCGAGCCG CACCGGCCGG ATCTGGTGCA GGTCGCCTAC 
CGGATGCTGG GCTCGGTGGC CGAGGCGGAG GACGTGGTGC AGGACGCGTT CCTGCGCTGG
AACGCCGCGC CGCGCGACGG GGTCGAGTCG CCGCGCGCGT TCCTCATCTG CACGGTCACG
CGGCTCTGCC TCGACCGCCT GAAGTCCGCG CGCACGCAGC GGGAGGAGTA TGTCGGGACC
TGGCTGCCGG AGCCGCTGGT GGAGGCGGAG GGCACGGGGC TGGCGCACGA CCTCTCGATC
GCGCTGCTCG TCACCCTGCA GCGCCTCTCG CCGCTCGAGC GCGCCGCGTT CCTGCTCCAC
GACGTGTTCG ACATGGAGTT CGCGGACGTC GCGGGCGTGC TGGCGCGCTC CGAGGCCGCG
GTCCGCCAGC TCGCGGCGCG CGCGCGGGGG CACGTGCGCG AGGCGAGGCC GCGCTTCCGC
GCGTCCGACG AGGAGGCGCG GCGACTCGCC GACGCCTTCC AGGCGGCGCT GACGAGCGGC
GACCTCGGGA CGCTCTCGAG GCTGCTCGCG GAGGACGCGG TGTTCTACGC GGACGGCGGC
GGCAAGCGCG CGGCGGTGCT CCAGCCGATC GAGGGCCGGG CCGCCATCGT GGAGTTCCTC
TCGAAGATCG TGAAGCACCC CTCGTTCCCG GGCGCGAAGG CCTACCAGCG CGCCTGGATC
AACGGCATGC CCGGATTCGT GGTGCACGGT CCCGAGGGCG TCGAGACCCT GGCGATCGAG
ATCGGCGACG GGCGCGTGGT GGGGATCTAC GCCGTCCGCA ACCCGGACAA GCTCCGCCAC
CTCTCGTAG
 
Protein sequence
MTGAARDFEP HRPDLVQVAY RMLGSVAEAE DVVQDAFLRW NAAPRDGVES PRAFLICTVT 
RLCLDRLKSA RTQREEYVGT WLPEPLVEAE GTGLAHDLSI ALLVTLQRLS PLERAAFLLH
DVFDMEFADV AGVLARSEAA VRQLAARARG HVREARPRFR ASDEEARRLA DAFQAALTSG
DLGTLSRLLA EDAVFYADGG GKRAAVLQPI EGRAAIVEFL SKIVKHPSFP GAKAYQRAWI
NGMPGFVVHG PEGVETLAIE IGDGRVVGIY AVRNPDKLRH LS