| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0736 |
|---|
| Symbol | |
|---|
| ID | 7299121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 831813 |
|---|
| End bp | 832844 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 83% |
|---|
| IMG OID | 643593531 |
|---|
| Product | type III secretion exporter |
|---|
| Protein accession | YP_002491157 |
|---|
| Protein GI | 220915853 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0536237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCA ACCGCACCGA GCAGCCCACC CCGCGACGGC TGCGCGAGGC GCGCCGGCGC
GGCGAGGTGG CGGTCAGCCG CGAGCTCACC GGCGCCGCGG CGCTGGCCGG CGGGCTGGCG
GCGCTGGCCG CCTCGGCGCC GGGCGCCGCG GCCGAGCTCG GCGCCATGCT CCGCGCTGCG
CTCGCCGCGG CGGGTGGCGC GCCGGCGAGC CCGGCGGCCG CGCTCCAGGG CGCGGCGGCG
GCGGTCCTGC GGCTCTCGCT CCCCGCCTGC GGCGCCGCGC TCGCGGTCGG CGCCGCGGCG
GCCGCGCTGC AGGCCGGGCC CGGACTCTCC TTCGCCGCGC TCGCGCCCCG GCTCGAGCGG
ATCGACCCGG CGCGCGGCCT GCGCCGCCTC CTCTCCGGCG CGCAGCTCGC CGCCGCGGCC
CTGGGGCTCG CGAAGTCCGC GGTGCTGGCG GCGCTGGCCT GGGGCTGGCT CGCCGGCGCG
GCGCCGTCGC TCGCCGCGCT CCCGCGGCTC GGCCCGGCCG CGCTCTGGCG CGCCCCGGCG
GTCCTCGGCG GGCTGGCCTG GCGCCTCGCG GCGGCGTTCG CGGTGCTCGG CGCGCTCGAC
CTCGCGCTGG TGCGCCGCCG CCACCGGCGC GCCCTCATGA TGACCCGCGA CGAGGTGCGC
CGCGAGCACC GGGAGGACGA GGGCGATCCG CTGCACCGCG CCGCGCGGCA GCGGCGCCAC
CGGGCCCTGC TCGAGGCGCC CGCGGTGGCG CGCGCCACGG TGGTGGTGGT GAACCCGACG
CACCTCGCGG TGGCGCTGCA GCACGACCGC CGGGGCGGCG GCGCTCCGCG CGTGGTCGCG
AAGGGCGCGG GCGAGGCGGC GGCGCGCATC CGGTCCGCCG CGCGCCGGGC CGGCGTCCCG
GTGGTCCGGG ACGTCGCGCT CGCCCGCGCC CTGCACCGCC TCGCCGAGGT CGGCGACGAG
ATCCCCGAGG CGCTCTACGA GGCCGCCGCC GCGGTCCTCG CACACCTGTA CGGCCTGGAG
GCCCAGCCAT GA
|
|---|
| Protein sequence | MSGNRTEQPT PRRLREARRR GEVAVSRELT GAAALAGGLA ALAASAPGAA AELGAMLRAA
LAAAGGAPAS PAAALQGAAA AVLRLSLPAC GAALAVGAAA AALQAGPGLS FAALAPRLER
IDPARGLRRL LSGAQLAAAA LGLAKSAVLA ALAWGWLAGA APSLAALPRL GPAALWRAPA
VLGGLAWRLA AAFAVLGALD LALVRRRHRR ALMMTRDEVR REHREDEGDP LHRAARQRRH
RALLEAPAVA RATVVVVNPT HLAVALQHDR RGGGAPRVVA KGAGEAAARI RSAARRAGVP
VVRDVALARA LHRLAEVGDE IPEALYEAAA AVLAHLYGLE AQP
|
|---|
| |