| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0694 |
|---|
| Symbol | |
|---|
| ID | 7300416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 778726 |
|---|
| End bp | 780030 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643593489 |
|---|
| Product | TolB domain protein |
|---|
| Protein accession | YP_002491115 |
|---|
| Protein GI | 220915811 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
|---|
| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.659148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCC GCCGTGCCCT CGCCCTCGCC GCGCTCGCGC TGGCCGTCTC CCCCGCGCTC
GCCGCGCAGG AGCGCCCCAC CATCGTGGTC GGCTCGCCCG ACTTCCGCCC GCTGCCCATC
GCGGTGGCGG CGTTCCAGGG CGAGGGCGAC GCCGGCGCCG CCGCGACCCA GACCGCGGAG
GTGGTGCGCG CCGACCTGGT GCTGTCGGGC CTGTTCGACG TGCTCGACCC GCGGGGCTTC
CTCGCCGATC CGTCGGAGGG CTTCGCGGCG CCGTCGATCC GGTTCGCGCG CTGGGCCGAC
GTGGGCGCGG ACGGCCTCGC CAAGGCGCGC GTGCGCCGCG GACCGGCCGG CCTGGAGGGC
GAGCTCCACC TGTACGAGGT CCGCGCCGGG CGCGAGGTGC TGGTGAAGCT GCTGCGCGTG
GACGGCGCCG ACGCGCGCTC GCTCGCCCAC CGGATGGCCG ACGAGATCGT GCGCTACTAC
ACGCGCGAGC CCGGCATCTT CGCGACGCGC ATCGCCGCGA TCCGCCGCGG CCGCGGCACC
TGGGAGCTCG TGACGCAGGA CATGGACGGC GGGAACCAGC AGGTCCTGCT GTCCGAGCGG
AGCATCCTCA TGTCGCCGGC GTGGCGCCCG GACGGCCGCG AGATCCTGGT CACCAGCTAC
CGGTCCGGCC GGCCGGAGCT GTGGGCCTAC CGCTTCTCCG ACCGCGCGTT CCGCCCGCTG
GGCCGCCACC GCAACGCGTT CGGCGGCGTG TACTCGCCCG ACGGCTCCCG CATCGCGTTC
ACCGTCAGCG AAGGCAACGT CACCGATCTC TGGGTGATGT CCGCCGACGG CGCCGGCGCG
CGCAAGCTCA CCAGCGACCC CGCCATCGAC GTGTCGCCCA CCTGGTCGCC CGACGGCCGC
CGCATCGCGT TCGTCTCCGA TCGCTCCGGC ACCCCGCAGA TCTACGTGAT GGGCGCGGAC
GGCTCGGGCG CGCGGCGCCT GACGTTCCAG GGCAACTACA ACCAGACGCC GCAGTGGAGC
CCTCGCGGCG ACCTGATCGC GTTCACCGCG CGCGACGAGC GCAAGGTGTT CGACGTGTTC
GTGGTGTCGC CGGACTCGGG CGCCATCAAC CGCATCACCC AGGACCAGGG GCGCACCAAC
GAGGAGCCGT CCTGGGCGCC CAACGGCCGG CTCATGATCT TCCGCACCGA CCGGAACGGC
GGGATCCAGC TGGTCGTGTC GGACGCGCGC GGCGACCGCC AGACGCCGGT GACGAGCGGC
AAGACCGACC TGGCCGCGCC GGCCTGGGGC CCGCTGGCGC CGTAG
|
|---|
| Protein sequence | MTVRRALALA ALALAVSPAL AAQERPTIVV GSPDFRPLPI AVAAFQGEGD AGAAATQTAE
VVRADLVLSG LFDVLDPRGF LADPSEGFAA PSIRFARWAD VGADGLAKAR VRRGPAGLEG
ELHLYEVRAG REVLVKLLRV DGADARSLAH RMADEIVRYY TREPGIFATR IAAIRRGRGT
WELVTQDMDG GNQQVLLSER SILMSPAWRP DGREILVTSY RSGRPELWAY RFSDRAFRPL
GRHRNAFGGV YSPDGSRIAF TVSEGNVTDL WVMSADGAGA RKLTSDPAID VSPTWSPDGR
RIAFVSDRSG TPQIYVMGAD GSGARRLTFQ GNYNQTPQWS PRGDLIAFTA RDERKVFDVF
VVSPDSGAIN RITQDQGRTN EEPSWAPNGR LMIFRTDRNG GIQLVVSDAR GDRQTPVTSG
KTDLAAPAWG PLAP
|
|---|
| |