Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0586 |
Symbol | |
ID | 7300284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 659128 |
End bp | 659634 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643593380 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002491009 |
Protein GI | 220915705 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.236763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACGGCGA GCCACGACGA CGACATCGGG CGGATCGTCC GGGAGACCGC CCCGCGGCTA TACCGCCTCG CGGCGCGCCT CACCGGCGAC CTCGCGGAGG CCGAGGACGT GCTGCAGGAG AGCTACGTGC GAGCGTGCGC CGGGCTGGGC GGACGCGCGT TCCAGGGTCG CTCGTCGGTC GAGACCTGGC TGCACCGCAT CGTGGTGAAC GCCTCGCTCG ACGCGCTCCG CGCCCGCCGC CGCCGGAGCG TCCGCGAGAC GCACGCCGCG CCGGCCGACG AGGTGCTCGA CCCGGGCGCC TCGCTCGAGG CCCGCGCCGC GCTGCGCGAG CTGTCGGAGT GGCTGGACGA GCTGCCTGCG GAGCAGCGGG TGGCGCTGGT GCTGAAGGAG CTCGAGGGGC ACAGCACCGC CGAGGTGGCG ACGCTGCTGG GCTGCTCGGA GGGCGCGGTG GAGCAGCGGC TGGTGCGCGC GCGAGCGTTT CTGCGCGAGA GGAGGAAGCA TGCGTGA
|
Protein sequence | MTASHDDDIG RIVRETAPRL YRLAARLTGD LAEAEDVLQE SYVRACAGLG GRAFQGRSSV ETWLHRIVVN ASLDALRARR RRSVRETHAA PADEVLDPGA SLEARAALRE LSEWLDELPA EQRVALVLKE LEGHSTAEVA TLLGCSEGAV EQRLVRARAF LRERRKHA
|
| |