Gene A2cp1_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_0548 
Symbol 
ID7296827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand+ 
Start bp628372 
End bp628998 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content69% 
IMG OID643593342 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002490971 
Protein GI220915667 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAA ATCAGCTCCA GAGACCCCCC GATTGGTGCG TTGGCAAGCG CCAGCAGATC 
CTTGATGGGG CGCGCAAGGT GTTCCAGGAG CACGGGTACG AGCGGGCCAG CGTGGACGTG 
ATCGCCGCCC GAAGCGGTGT CTCCAAGGCC ACCCTCTACA ACCATTTCCA CGACAAGAGC 
GCGCTGTTCG TCGCCTGCTT CGAACAGGGC TCGAACCAGA TGCAGGCCGA CCTCGAGGCG 
CTGTTCGCCG AGACGAGCGA CGACCTCGAG TCGGCCCTCC AGGCCGCGGG GGAGCGCCTG 
CTCGGGAAGT TCCTCTCCAG CGAGGCGGTG GCGCTGTACC GGAGCGCGCT CGACGGGTTC 
CGCCTGCCCG ACATCGGGAA GATGCTGTAC GAGCGCGGCC CGCGGGTCAC GCACGAGCTC 
ATCGCCGCGG CGCTCTCGCG CTGGGCGGCG CGCGGCCTGC TGCGGCTCGA CGATCCGTAC 
TACGCGGCGG TGCAGTTCGT GAACCTGTGC CACGGCGACG TGATGATGCG CCTGCACCTG 
GGCGTGCTGC AGGAGGCCTC GCCGGACGAC GTCCGTGCCA CGGTGCGCCG CGCGGTGCAG 
ACGTTCCTGC GCGCCTTCCG CCCGTGA
 
Protein sequence
MAENQLQRPP DWCVGKRQQI LDGARKVFQE HGYERASVDV IAARSGVSKA TLYNHFHDKS 
ALFVACFEQG SNQMQADLEA LFAETSDDLE SALQAAGERL LGKFLSSEAV ALYRSALDGF 
RLPDIGKMLY ERGPRVTHEL IAAALSRWAA RGLLRLDDPY YAAVQFVNLC HGDVMMRLHL 
GVLQEASPDD VRATVRRAVQ TFLRAFRP